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KCTD5
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:13.4 nTPM
HPA:13.4 nTPM
GTEx:13.2 nTPM
FANTOM5:26.0 Scaled Tags Per Million
Pig:4.5 nTPM
Mouse:23.5 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.4
Sample id Sample description nTPM
Hippocampus
nTPM: 13.0
2148 Female, age 91, left hemisphere 13.5
2529 Female, age 94, left hemisphere 13.5
1855 Male, age 76, left hemisphere 13.0
1898 Male, age 80, left hemisphere 12.7
1911 Female, age 85, right hemisphere 12.7
2621 Female, age 67, right hemisphere 12.7
Dentate gyrus
nTPM: 12.7
2530 Female, age 94, left hemisphere 13.3
2528 Male, age 74, both hemispheres 13.2
2531 Female, age 67, both hemispheres 13.2
2246 Female, age 85, both hemispheres 12.9
2010 Male, age 76, both hemispheres 12.0
1927 Female, age 91, both hemispheres 11.7
Entorhinal gyrus
nTPM: 13.4
2117 Female, age 91, right hemisphere 14.7
2686 Male, age 75, right hemisphere 13.6
2764 Male, age 80, right hemisphere 13.5
1787 Male, age 76, left hemisphere 13.0
2613 Female, age 94, left hemisphere 12.8
1938 Female, age 85, left hemisphere 12.7
Hippocampus, CA1
nTPM: 12.7
2045 Male, age 76, both hemispheres 13.2
2082 Female, age 91, right hemisphere 13.2
2527 Male, age 74, both hemispheres 13.0
1873 Female, age 85, both hemispheres 12.9
2749 Male, age 80, left hemisphere 11.4
Hippocampus, CA2
nTPM: 12.8
2113 Female, age 91, right hemisphere 13.2
2437 Female, age 94, left hemisphere 13.2
1940 Female, age 85, left hemisphere 13.1
1963 Male, age 80, left hemisphere 13.0
2249 Male, age 74, both hemispheres 12.3
1892 Male, age 76, both hemispheres 11.9
Hippocampus, CA3
nTPM: 12.5
2861 Female, age 67, both hemispheres 13.1
1867 Male, age 76, both hemispheres 13.0
2620 Female, age 94, left hemisphere 12.8
1891 Female, age 85, both hemispheres 12.6
2436 Male, age 74, both hemispheres 11.9
2137 Male, age 80, left hemisphere 11.6
Parahippocampal cortex
nTPM: 12.7
2692 Male, age 74, both hemispheres 13.4
2532 Female, age 72, left hemisphere 13.3
1933 Female, age 85, both hemispheres 13.2
2622 Female, age 67, right hemisphere 13.0
2250 Female, age 67, right hemisphere 12.9
1850 Male, age 80, both hemispheres 12.4
2018 Male, age 76, both hemispheres 12.3
2693 Female, age 94, both hemispheres 12.3
1990 Female, age 91, right hemisphere 12.2
2245 Female, age 91, both hemispheres 12.2
Perirhinal gyrus
nTPM: 12.6
1794 Male, age 80, right hemisphere 13.1
2848 Male, age 76, right hemisphere 12.9
2521 Female, age 94, right hemisphere 12.4
1841 Female, age 85, right hemisphere 12.3
1847 Female, age 91, left hemisphere 12.1
Subiculum
nTPM: 13.0
2729 Female, age 91, right hemisphere 13.9
2042 Male, age 76, both hemispheres 13.3
2619 Male, age 74, both hemispheres 13.0
1977 Female, age 85, both hemispheres 12.7
1901 Male, age 80, both hemispheres 12.6
2438 Female, age 94, left hemisphere 12.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.2
Samples: 197

Max nTPM: 28.1
Min nTPM: 7.3
Std nTPM: 2.9
Median nTPM: 13.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 28.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 23.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 20.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 20.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 20.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 19.9
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 19.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 19.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 19.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 18.8
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 18.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.0
FF:10169-103B7 60 years, female 27.2
FF:10153-102I9 76 years, female 24.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.2
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.5
Sample A Female 4.9
Sample B Female 4.2
Sample C Male 4.3
Sample D Male 3.5
Entorhinal cortex
nTPM: 4.1
Samples: 4

Max nTPM: 4.4
Min nTPM: 3.3
Sample A Female 4.3
Sample B Female 4.4
Sample C Male 4.4
Sample D Male 3.3
Subiculum
nTPM: 4.5
Samples: 4

Max nTPM: 5.4
Min nTPM: 3.7
Sample A Female 5.4
Sample B Female 4.1
Sample C Male 4.7
Sample D Male 3.7
Ventral hippocampus
nTPM: 4.5
Samples: 4

Max nTPM: 5.9
Min nTPM: 3.5
Sample A Female 4.5
Sample B Female 3.5
Sample C Male 5.9
Sample D Male 4.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.4
Samples: 4

Max nTPM: 22.1
Min nTPM: 18.5
Sample A Male 21.2
Sample B Male 18.5
Sample C Female 22.1
Sample D Female 19.9
Hippocampal formation
nTPM: 23.5
Samples: 4

Max nTPM: 25.3
Min nTPM: 22.3
Sample A Male 25.3
Sample B Male 22.3
Sample C Female 23.6
Sample D Female 22.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
1629 Antisense, RP_040428_01_E07, Mouse strain C57BL/6J (56 days, male) 0.4
1630 Antisense, RP_040428_01_E07, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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