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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:31.9 nTPM
HPA:31.9 nTPM
GTEx:34.2 nTPM
FANTOM5:95.0 Scaled Tags Per Million
Pig:56.2 nTPM
Mouse:123.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045174Antibody CAB032821
Glial cells LowLow
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.9
Sample id Sample description nTPM
Hippocampus
nTPM: 26.2
1898 Male, age 80, left hemisphere 38.8
2529 Female, age 94, left hemisphere 26.9
2621 Female, age 67, right hemisphere 25.1
2148 Female, age 91, left hemisphere 24.8
1855 Male, age 76, left hemisphere 23.4
1911 Female, age 85, right hemisphere 18.3
Dentate gyrus
nTPM: 25.1
2528 Male, age 74, both hemispheres 32.8
1927 Female, age 91, both hemispheres 28.4
2010 Male, age 76, both hemispheres 26.8
2246 Female, age 85, both hemispheres 23.7
2530 Female, age 94, left hemisphere 23.0
2531 Female, age 67, both hemispheres 15.7
Entorhinal gyrus
nTPM: 26.3
2764 Male, age 80, right hemisphere 32.8
2117 Female, age 91, right hemisphere 31.0
1938 Female, age 85, left hemisphere 30.5
1787 Male, age 76, left hemisphere 25.9
2613 Female, age 94, left hemisphere 24.2
2686 Male, age 75, right hemisphere 13.4
Hippocampus, CA1
nTPM: 29.0
2749 Male, age 80, left hemisphere 43.3
1873 Female, age 85, both hemispheres 29.6
2527 Male, age 74, both hemispheres 29.1
2082 Female, age 91, right hemisphere 24.1
2045 Male, age 76, both hemispheres 18.6
Hippocampus, CA2
nTPM: 29.1
2249 Male, age 74, both hemispheres 38.0
1963 Male, age 80, left hemisphere 34.2
1892 Male, age 76, both hemispheres 33.1
2113 Female, age 91, right hemisphere 24.2
1940 Female, age 85, left hemisphere 24.0
2437 Female, age 94, left hemisphere 21.0
Hippocampus, CA3
nTPM: 24.5
2436 Male, age 74, both hemispheres 32.3
2137 Male, age 80, left hemisphere 29.1
1867 Male, age 76, both hemispheres 26.2
1891 Female, age 85, both hemispheres 20.3
2620 Female, age 94, left hemisphere 19.8
2861 Female, age 67, both hemispheres 19.6
Parahippocampal cortex
nTPM: 24.1
1850 Male, age 80, both hemispheres 34.0
1933 Female, age 85, both hemispheres 28.4
1990 Female, age 91, right hemisphere 25.8
2532 Female, age 72, left hemisphere 25.6
2245 Female, age 91, both hemispheres 24.1
2250 Female, age 67, right hemisphere 24.0
2018 Male, age 76, both hemispheres 20.3
2692 Male, age 74, both hemispheres 19.7
2622 Female, age 67, right hemisphere 19.6
2693 Female, age 94, both hemispheres 19.1
Perirhinal gyrus
nTPM: 31.9
1847 Female, age 91, left hemisphere 38.3
1794 Male, age 80, right hemisphere 35.5
1841 Female, age 85, right hemisphere 30.8
2848 Male, age 76, right hemisphere 28.6
2521 Female, age 94, right hemisphere 26.4
Subiculum
nTPM: 23.4
2619 Male, age 74, both hemispheres 28.0
1977 Female, age 85, both hemispheres 27.6
2729 Female, age 91, right hemisphere 25.1
1901 Male, age 80, both hemispheres 24.4
2438 Female, age 94, left hemisphere 17.8
2042 Male, age 76, both hemispheres 17.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.2
Samples: 197

Max nTPM: 61.1
Min nTPM: 15.3
Std nTPM: 8.9
Median nTPM: 33.6
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 61.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 59.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 57.4
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 55.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 54.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 54.2
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 52.1
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 51.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 51.7
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 50.7
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 48.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 95.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 95.0
FF:10169-103B7 60 years, female 98.3
FF:10153-102I9 76 years, female 91.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 56.2
Samples: 4

Max nTPM: 69.7
Min nTPM: 38.8
Sample A Female 69.7
Sample B Female 55.7
Sample C Male 60.4
Sample D Male 38.8
Entorhinal cortex
nTPM: 44.7
Samples: 4

Max nTPM: 48.3
Min nTPM: 39.2
Sample A Female 48.0
Sample B Female 43.2
Sample C Male 48.3
Sample D Male 39.2
Subiculum
nTPM: 50.9
Samples: 4

Max nTPM: 62.0
Min nTPM: 45.4
Sample A Female 62.0
Sample B Female 46.2
Sample C Male 49.9
Sample D Male 45.4
Ventral hippocampus
nTPM: 53.7
Samples: 4

Max nTPM: 67.3
Min nTPM: 36.8
Sample A Female 56.2
Sample B Female 36.8
Sample C Male 67.3
Sample D Male 54.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 123.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 120.1
Samples: 4

Max nTPM: 131.3
Min nTPM: 114.6
Sample A Male 116.8
Sample B Male 114.6
Sample C Female 117.5
Sample D Female 131.3
Hippocampal formation
nTPM: 123.4
Samples: 4

Max nTPM: 134.8
Min nTPM: 118.7
Sample A Male 120.6
Sample B Male 119.5
Sample C Female 134.8
Sample D Female 118.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.