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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:101.9 nTPM
HPA:101.9 nTPM
GTEx:89.2 nTPM
FANTOM5:26.0 Scaled Tags Per Million
Pig:60.0 nTPM
Mouse:168.4 nTPM
Allen mouse:11.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044315
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 101.9
Sample id Sample description nTPM
Hippocampus
nTPM: 95.5
1898 Male, age 80, left hemisphere 101.1
1855 Male, age 76, left hemisphere 96.5
2621 Female, age 67, right hemisphere 95.9
2529 Female, age 94, left hemisphere 95.8
2148 Female, age 91, left hemisphere 92.1
1911 Female, age 85, right hemisphere 91.7
Dentate gyrus
nTPM: 95.2
2528 Male, age 74, both hemispheres 98.5
2530 Female, age 94, left hemisphere 98.2
1927 Female, age 91, both hemispheres 96.0
2010 Male, age 76, both hemispheres 95.1
2246 Female, age 85, both hemispheres 92.7
2531 Female, age 67, both hemispheres 90.8
Entorhinal gyrus
nTPM: 95.7
2764 Male, age 80, right hemisphere 100.9
1938 Female, age 85, left hemisphere 98.5
1787 Male, age 76, left hemisphere 97.9
2613 Female, age 94, left hemisphere 93.6
2117 Female, age 91, right hemisphere 93.5
2686 Male, age 75, right hemisphere 89.6
Hippocampus, CA1
nTPM: 97.9
2749 Male, age 80, left hemisphere 104.5
1873 Female, age 85, both hemispheres 97.2
2527 Male, age 74, both hemispheres 96.9
2045 Male, age 76, both hemispheres 95.6
2082 Female, age 91, right hemisphere 95.2
Hippocampus, CA2
nTPM: 97.8
2249 Male, age 74, both hemispheres 102.5
1892 Male, age 76, both hemispheres 102.0
1963 Male, age 80, left hemisphere 99.2
2437 Female, age 94, left hemisphere 96.5
1940 Female, age 85, left hemisphere 94.6
2113 Female, age 91, right hemisphere 91.9
Hippocampus, CA3
nTPM: 96.4
2137 Male, age 80, left hemisphere 101.5
2436 Male, age 74, both hemispheres 97.9
1867 Male, age 76, both hemispheres 97.8
1891 Female, age 85, both hemispheres 96.7
2620 Female, age 94, left hemisphere 96.0
2861 Female, age 67, both hemispheres 88.5
Parahippocampal cortex
nTPM: 95.1
1850 Male, age 80, both hemispheres 102.8
1933 Female, age 85, both hemispheres 100.5
2250 Female, age 67, right hemisphere 96.9
1990 Female, age 91, right hemisphere 95.2
2532 Female, age 72, left hemisphere 94.8
2018 Male, age 76, both hemispheres 94.6
2693 Female, age 94, both hemispheres 93.8
2245 Female, age 91, both hemispheres 92.7
2692 Male, age 74, both hemispheres 91.7
2622 Female, age 67, right hemisphere 88.0
Perirhinal gyrus
nTPM: 101.9
1847 Female, age 91, left hemisphere 106.6
1794 Male, age 80, right hemisphere 105.0
1841 Female, age 85, right hemisphere 101.6
2848 Male, age 76, right hemisphere 98.2
2521 Female, age 94, right hemisphere 97.8
Subiculum
nTPM: 94.0
1977 Female, age 85, both hemispheres 99.1
2619 Male, age 74, both hemispheres 97.6
1901 Male, age 80, both hemispheres 96.9
2042 Male, age 76, both hemispheres 92.4
2729 Female, age 91, right hemisphere 92.2
2438 Female, age 94, left hemisphere 86.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 89.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 89.2
Samples: 197

Max nTPM: 165.8
Min nTPM: 52.1
Std nTPM: 16.1
Median nTPM: 87.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 165.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 134.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 132.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 132.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 121.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 120.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 119.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 117.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 116.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 115.0
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 114.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.0
FF:10153-102I9 76 years, female 34.3
FF:10169-103B7 60 years, female 17.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 60.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 60.0
Samples: 4

Max nTPM: 77.1
Min nTPM: 44.0
Sample A Female 77.1
Sample B Female 60.3
Sample C Male 58.6
Sample D Male 44.0
Entorhinal cortex
nTPM: 53.2
Samples: 4

Max nTPM: 64.0
Min nTPM: 40.0
Sample A Female 55.1
Sample B Female 64.0
Sample C Male 53.6
Sample D Male 40.0
Subiculum
nTPM: 53.4
Samples: 4

Max nTPM: 68.6
Min nTPM: 46.2
Sample A Female 68.6
Sample B Female 50.2
Sample C Male 48.4
Sample D Male 46.2
Ventral hippocampus
nTPM: 55.7
Samples: 4

Max nTPM: 65.9
Min nTPM: 42.1
Sample A Female 57.9
Sample B Female 42.1
Sample C Male 65.9
Sample D Male 56.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 168.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 161.1
Samples: 4

Max nTPM: 170.6
Min nTPM: 148.9
Sample A Male 148.9
Sample B Male 157.2
Sample C Female 170.6
Sample D Female 167.5
Hippocampal formation
nTPM: 168.4
Samples: 4

Max nTPM: 186.2
Min nTPM: 157.9
Sample A Male 186.2
Sample B Male 157.9
Sample C Female 165.7
Sample D Female 163.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.0
75695664 Antisense, RP_060518_04_D03, Mouse strain C57BL/6J (56 days, male) 11.0

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The Human Protein Atlas

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