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SMIM4
PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:16.9 nTPM
HPA:16.9 nTPM
FANTOM5:55.3 Scaled Tags Per Million
Pig:31.3 nTPM
Mouse:36.1 nTPM
Allen mouse:0.0 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 16.9
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 13.8
1984 Male, age 76, both hemispheres 14.8
2090 Male, age 80, both hemispheres 14.0
2301 Female, age 85, both hemispheres 13.2
2188 Female, age 91, both hemispheres 13.1
Area postrema
nTPM: 12.8
2306 Male, age 80, both hemispheres 13.8
2054 Male, age 76, both hemispheres 12.4
2799 Male, age 61, both hemispheres 12.0
Cuneate nuclei
nTPM: 12.9
2376 Male, age 61, both hemispheres 13.1
2381 Male, age 80, both hemispheres 12.8
2131 Male, age 76, both hemispheres 12.7
Dorsal cochlear nucleus
nTPM: 13.5
2378 Male, age 80, both hemispheres 14.7
2370 Male, age 61, both hemispheres 14.1
2802 Male, age 74, right hemisphere 13.4
2058 Male, age 76, both hemispheres 12.6
2187 Female, age 91, both hemispheres 12.5
Dorsal medullary reticular nucleus
nTPM: 13.9
2040 Female, age 85, both hemispheres 15.1
2373 Male, age 61, both hemispheres 14.3
2088 Male, age 76, both hemispheres 12.4
Dorsal motor vagal complex
nTPM: 13.6
2000 Male, age 74, unknown 15.1
2813 Female, age 72, unknown 14.2
2133 Female, age 91, both hemispheres 14.1
2844 Male, age 55, unknown 14.0
2807 Female, age 85, both hemispheres 13.0
2643 Male, age 74, both hemispheres 12.9
2185 Male, age 76, both hemispheres 12.7
2797 Male, age 61, both hemispheres 12.7
Dorsal tegmental nucleus
nTPM: 13.9
2326 Male, age 74, both hemispheres 15.4
1936 Male, age 76, left hemisphere 14.4
2358 Male, age 61, both hemispheres 13.3
2083 Male, age 80, both hemispheres 12.7
Dorsolateral tegmental area
nTPM: 15.4
2360 Male, age 74, both hemispheres 21.1
2337 Male, age 61, both hemispheres 14.6
2751 Female, age 85, both hemispheres 14.4
2654 Male, age 80, both hemispheres 13.8
2141 Male, age 76, both hemispheres 13.0
Gigantocellular reticular nuclei, medullary
nTPM: 14.2
2314 Male, age 61, both hemispheres 15.6
1876 Female, age 85, both hemispheres 15.4
2022 Male, age 76, right hemisphere 15.1
2387 Female, age 91, both hemispheres 13.4
2310 Male, age 80, both hemispheres 13.3
2462 Male, age 74, both hemispheres 12.4
Gigantocellular reticular nuclei, pars
nTPM: 13.2
2706 Male, age 80, both hemispheres 13.7
2330 Male, age 80, both hemispheres 13.5
2336 Male, age 61, both hemispheres 13.3
2168 Male, age 76, both hemispheres 12.9
2084 Female, age 85, both hemispheres 12.6
Inferior olive
nTPM: 13.7
2563 Male, age 74, both hemispheres 14.6
2085 Female, age 85, both hemispheres 14.3
2379 Male, age 80, both hemispheres 13.6
2178 Male, age 61, both hemispheres 13.5
2628 Female, age 91, both hemispheres 12.5
Kolliker-Fuse nucleus
nTPM: 13.1
2315 Male, age 76, right hemisphere 14.0
2163 Male, age 80, both hemispheres 12.7
2793 Female, age 91, left hemisphere 12.5
Lateral lemniscal nuclei
nTPM: 13.0
2746 Female, age 85, left hemisphere 14.9
2169 Male, age 76, both hemispheres 13.2
2036 Male, age 80, both hemispheres 12.6
2453 Male, age 74, right hemisphere 12.5
2320 Female, age 91, left hemisphere 12.0
Lateral medullary reticular nucleus
nTPM: 13.8
2305 Male, age 74, both hemispheres 15.0
2374 Male, age 61, both hemispheres 13.9
2852 Male, age 80, both hemispheres 13.9
2190 Female, age 85, both hemispheres 13.7
2804 Female, age 91, both hemispheres 13.5
2044 Male, age 76, both hemispheres 13.0
Lateral parabrachial nucleus
nTPM: 14.1
2013 Male, age 80, both hemispheres 14.5
2790 Male, age 61, both hemispheres 14.2
2792 Male, age 76, both hemispheres 14.0
2139 Female, age 85, right hemisphere 13.9
Lateral vestibular nucleus
nTPM: 13.6
2311 Male, age 80, both hemispheres 14.5
2184 Male, age 76, both hemispheres 12.6
Locus coeruleus
nTPM: 15.0
2123 Female, age 91, both hemispheres 17.6
2014 Male, age 55, unknown 15.4
2788 Male, age 74, unknown 15.3
2720 Male, age 74, both hemispheres 15.2
1980 Male, age 76, both hemispheres 15.1
2162 Male, age 80, both hemispheres 13.3
2317 Female, age 72, unknown 13.0
Medial olivary nucleus
nTPM: 14.0
1943 Male, age 61, both hemispheres 14.7
2851 Male, age 80, both hemispheres 14.5
1962 Male, age 76, both hemispheres 14.0
2138 Female, age 91, both hemispheres 12.9
Medial parabrachial nucleus
nTPM: 14.1
2463 Female, age 85, right hemisphere 14.7
2170 Female, age 91, both hemispheres 14.3
2156 Male, age 61, both hemispheres 14.1
2786 Male, age 76, both hemispheres 13.8
2854 Male, age 80, both hemispheres 13.5
Medial periolivary nuclei
nTPM: 12.9
2458 Female, age 91, both hemispheres 13.6
2171 Female, age 85, both hemispheres 13.2
2081 Male, age 80, both hemispheres 13.0
2791 Male, age 74, right hemisphere 12.9
2063 Male, age 76, both hemispheres 11.8
Medial vestibular nucleus
nTPM: 14.3
2743 Female, age 85, both hemispheres 16.5
2801 Male, age 74, both hemispheres 14.9
2803 Female, age 91, both hemispheres 13.8
2134 Male, age 76, both hemispheres 13.6
2093 Male, age 80, both hemispheres 13.4
2624 Male, age 61, both hemispheres 13.3
Motor facial nucleus
nTPM: 12.9
2126 Male, age 61, both hemispheres 14.2
2365 Male, age 74, right hemisphere 13.5
2697 Female, age 85, both hemispheres 13.2
2795 Female, age 91, both hemispheres 12.8
2062 Male, age 76, both hemispheres 12.4
2327 Male, age 80, both hemispheres 11.6
Motor hypoglossal nucleus
nTPM: 12.2
2277 Male, age 76, both hemispheres 13.3
2132 Female, age 85, both hemispheres 12.3
2125 Female, age 91, both hemispheres 12.1
2182 Male, age 80, both hemispheres 11.9
2461 Male, age 61, both hemispheres 11.6
Motor trigeminal nucleus
nTPM: 13.3
2335 Male, age 61, both hemispheres 14.5
2560 Male, age 74, both hemispheres 14.2
2309 Male, age 76, both hemispheres 13.6
2079 Male, age 80, both hemispheres 12.2
2321 Female, age 91, both hemispheres 12.2
Nuclei of the trapezoid body
nTPM: 13.1
2159 Male, age 61, both hemispheres 13.5
2368 Female, age 91, both hemispheres 13.3
2735 Female, age 85, both hemispheres 13.0
1983 Male, age 76, both hemispheres 12.8
2166 Male, age 80, both hemispheres 12.7
Nucleus ambiguus
nTPM: 13.5
2071 Male, age 76, both hemispheres 13.8
2096 Female, age 85, both hemispheres 13.3
Nucleus cuneatus
nTPM: 13.1
2808 Female, age 85, both hemispheres 14.2
2562 Male, age 61, both hemispheres 13.5
2564 Male, age 74, both hemispheres 13.2
2380 Male, age 80, both hemispheres 13.1
2100 Male, age 76, both hemispheres 13.0
2805 Female, age 91, both hemispheres 11.7
Nucleus gracilis
nTPM: 14.4
2299 Female, age 85, both hemispheres 15.6
2627 Male, age 74, both hemispheres 14.1
2382 Male, age 80, both hemispheres 13.5
Nucleus raphe magnus
nTPM: 13.6
2051 Male, age 76, both hemispheres 14.6
2160 Male, age 61, both hemispheres 14.0
2172 Female, age 85, both hemispheres 13.6
2459 Female, age 91, both hemispheres 13.4
2455 Male, age 74, both hemispheres 13.3
2328 Male, age 80, both hemispheres 12.8
Nucleus raphe obscurus
nTPM: 13.2
2142 Male, age 76, midline 13.8
2845 Female, age 85, midline 13.3
2800 Male, age 61, midline 12.5
Nucleus raphe pallidus
nTPM: 13.1
2183 Male, age 80, midline 13.8
1924 Male, age 61, midline 13.7
2145 Male, age 76, midline 11.8
Nucleus tractus solitarii
nTPM: 15.6
2144 Female, age 91, right hemisphere 19.9
2191 Female, age 85, both hemispheres 16.5
2307 Male, age 80, both hemispheres 13.6
2656 Male, age 76, both hemispheres 12.3
Paramedian reticular nucleus
nTPM: 14.1
2057 Male, age 80, both hemispheres 15.0
2313 Male, age 61, both hemispheres 14.1
2050 Female, age 85, both hemispheres 13.8
2052 Male, age 76, both hemispheres 13.4
Parvicellular reticular nuclei
nTPM: 13.6
2095 Male, age 76, both hemispheres 14.3
2119 Male, age 80, both hemispheres 13.5
2558 Male, age 74, both hemispheres 13.1
Parvicellular reticular nuclei, medullary
nTPM: 14.1
2091 Female, age 85, both hemispheres 14.6
2189 Female, age 91, both hemispheres 14.3
2181 Male, age 80, left hemisphere 13.4
Peritrigeminal nucleus
nTPM: 13.5
2067 Female, age 85, both hemispheres 14.0
2136 Male, age 76, both hemispheres 13.8
2179 Male, age 61, both hemispheres 12.8
Pontine nuclei
nTPM: 14.3
2727 Male, age 61, right hemisphere 15.2
2454 Male, age 74, left hemisphere 15.0
1968 Male, age 76, left hemisphere 14.6
1863 Male, age 55, unknown 14.3
2319 Female, age 91, both hemispheres 14.0
2115 Male, age 80, left hemisphere 13.9
2787 Female, age 85, both hemispheres 13.7
2109 Female, age 72, unknown 13.5
Pontine raphe nucleus
nTPM: 13.5
2853 Male, age 76, midline 13.7
2122 Female, age 85, midline 13.3
Posteroventral cochlear nucleus
nTPM: 15.1
2341 Male, age 80, both hemispheres 16.2
2135 Female, age 91, both hemispheres 15.3
2371 Male, age 61, both hemispheres 15.0
2070 Male, age 76, both hemispheres 14.8
2752 Female, age 85, both hemispheres 14.0
Prepositus hypoglossal nucleus
nTPM: 14.4
2086 Male, age 80, both hemispheres 15.2
2855 Female, age 85, right hemisphere 13.6
Principal sensory trigeminal nucleus
nTPM: 13.8
2008 Male, age 80, left hemisphere 14.4
2367 Female, age 91, left hemisphere 13.9
2158 Male, age 61, both hemispheres 13.7
2324 Male, age 76, both hemispheres 13.0
Reticular pontine nucleus, caudal
nTPM: 13.5
2559 Male, age 74, both hemispheres 15.1
2092 Male, age 76, both hemispheres 13.0
2457 Female, age 91, both hemispheres 13.0
2332 Male, age 80, right hemisphere 12.9
Reticular pontine nucleus, oral
nTPM: 14.6
2361 Male, age 74, both hemispheres 16.1
2012 Female, age 85, both hemispheres 15.6
1939 Male, age 80, both hemispheres 14.5
2167 Male, age 76, both hemispheres 14.0
2366 Female, age 91, both hemispheres 13.0
Reticulotegmental nucleus
nTPM: 12.5
2325 Male, age 76, both hemispheres 13.1
2333 Male, age 80, both hemispheres 13.1
2452 Male, age 74, both hemispheres 12.2
2322 Female, age 91, both hemispheres 11.7
Spinal trigeminal nucleus, caudal
nTPM: 13.2
2390 Female, age 91, both hemispheres 13.9
2312 Male, age 61, both hemispheres 13.4
2308 Male, age 80, both hemispheres 13.1
2447 Male, age 76, both hemispheres 13.0
2642 Male, age 74, both hemispheres 12.3
Spinal trigeminal nucleus, interpolar
nTPM: 14.2
2389 Female, age 91, both hemispheres 14.5
2066 Male, age 76, right hemisphere 14.4
2625 Male, age 61, both hemispheres 14.2
2386 Female, age 85, both hemispheres 14.1
2033 Male, age 80, both hemispheres 13.6
Spinal trigeminal nucleus, oral
nTPM: 14.6
2164 Male, age 80, both hemispheres 15.1
2737 Female, age 85, both hemispheres 15.1
1978 Male, age 76, both hemispheres 13.5
Spinal vestibular nucleus
nTPM: 13.5
2806 Female, age 85, both hemispheres 14.6
2780 Male, age 80, both hemispheres 13.8
2748 Male, age 76, both hemispheres 13.7
2186 Female, age 91, both hemispheres 13.4
2796 Male, age 61, both hemispheres 13.2
2384 Male, age 74, both hemispheres 12.6
Subcoeruleus area
nTPM: 14.0
2369 Female, age 85, left hemisphere 15.2
1958 Male, age 80, both hemispheres 14.9
2323 Female, age 91, left hemisphere 13.7
2451 Male, age 74, both hemispheres 13.5
2089 Male, age 76, left hemisphere 12.7
Superior olive
nTPM: 13.6
2364 Male, age 74, right hemisphere 14.9
2329 Male, age 80, right hemisphere 13.9
1875 Female, age 85, both hemispheres 13.8
2020 Male, age 76, both hemispheres 13.2
2561 Female, age 91, both hemispheres 12.1
Superior vestibular nucleus
nTPM: 16.9
2383 Male, age 74, both hemispheres 21.8
2015 Male, age 80, both hemispheres 15.2
2061 Male, age 76, both hemispheres 13.7
Ventral medullary reticular nucleus
nTPM: 12.8
2372 Male, age 61, both hemispheres 13.6
2060 Male, age 76, both hemispheres 12.0
Ventral periolivary nuclei
nTPM: 12.7
2023 Male, age 76, both hemispheres 13.5
2130 Female, age 85, both hemispheres 13.0
2165 Male, age 80, both hemispheres 12.7
2794 Female, age 91, left hemisphere 11.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 13.0
1986 Male, age 76, both hemispheres 14.3
2741 Female, age 85, both hemispheres 13.2
2118 Male, age 80, both hemispheres 12.9
2180 Male, age 61, both hemispheres 12.4
2302 Female, age 91, both hemispheres 12.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 13.6
2840 Female, age 85, both hemispheres 15.0
2456 Female, age 91, both hemispheres 13.9
2161 Male, age 80, both hemispheres 13.5
2449 Male, age 74, both hemispheres 13.2
2359 Male, age 61, both hemispheres 13.1
1959 Male, age 76, both hemispheres 12.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 39.7
FF:10182-103D2 60 years, female 44.5
FF:10165-103B3 76 years, female 34.9
Medulla oblongata
Scaled Tags Per Million: 55.3
FF:10174-103C3 60 years, female 115.7
FF:10155-103A2 76 years, female 38.4
FF:10038-101F2 18-64 years, mixed 11.8
Pons
Scaled Tags Per Million: 12.9
FF:10033-101E6 18-54 years, mixed 12.9

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 31.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 27.0
Samples: 4

Max nTPM: 33.2
Min nTPM: 21.7
Sample A Female 22.2
Sample B Female 21.7
Sample C Male 33.2
Sample D Male 30.8
Pons
nTPM: 31.3
Samples: 4

Max nTPM: 36.4
Min nTPM: 22.7
Sample A Female 36.4
Sample B Female 22.7
Sample C Male 32.3
Sample D Male 33.8

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 36.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 36.1
Samples: 4

Max nTPM: 44.0
Min nTPM: 31.9
Sample A Male 31.9
Sample B Male 35.9
Sample C Female 44.0
Sample D Female 32.7

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.0
73512517 Antisense, RP_050816_02_G01, Mouse strain C57BL/6J (56 days, male) 0.0
Pons
Expression energy: 0.0
73512517 Antisense, RP_050816_02_G01, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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