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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni
Consensus:180.5 nTPM
HPA:180.5 nTPM
GTEx:174.9 nTPM
FANTOM5:169.7 Scaled Tags Per Million
Pig:73.3 nTPM
Mouse:15.0 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018481Antibody CAB017190
Glial cells HighHigh
Neuronal cells Not detectedHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 180.5
Sample id Sample description nTPM
Hippocampus
nTPM: 179.8
1911 Female, age 85, right hemisphere 188.2
2529 Female, age 94, left hemisphere 186.3
1855 Male, age 76, left hemisphere 180.5
1898 Male, age 80, left hemisphere 180.0
2148 Female, age 91, left hemisphere 177.0
2621 Female, age 67, right hemisphere 166.7
Dentate gyrus
nTPM: 170.4
2528 Male, age 74, both hemispheres 189.1
2010 Male, age 76, both hemispheres 174.7
2246 Female, age 85, both hemispheres 172.9
2530 Female, age 94, left hemisphere 168.1
1927 Female, age 91, both hemispheres 162.6
2531 Female, age 67, both hemispheres 155.1
Entorhinal gyrus
nTPM: 169.5
2117 Female, age 91, right hemisphere 204.7
1938 Female, age 85, left hemisphere 174.5
1787 Male, age 76, left hemisphere 167.4
2686 Male, age 75, right hemisphere 163.2
2764 Male, age 80, right hemisphere 156.0
2613 Female, age 94, left hemisphere 151.5
Hippocampus, CA1
nTPM: 170.6
2527 Male, age 74, both hemispheres 184.5
1873 Female, age 85, both hemispheres 177.7
2082 Female, age 91, right hemisphere 174.1
2045 Male, age 76, both hemispheres 162.0
2749 Male, age 80, left hemisphere 154.5
Hippocampus, CA2
nTPM: 172.7
2249 Male, age 74, both hemispheres 185.8
2113 Female, age 91, right hemisphere 178.9
1940 Female, age 85, left hemisphere 174.7
1963 Male, age 80, left hemisphere 173.7
2437 Female, age 94, left hemisphere 165.7
1892 Male, age 76, both hemispheres 157.2
Hippocampus, CA3
nTPM: 168.2
1891 Female, age 85, both hemispheres 192.3
2436 Male, age 74, both hemispheres 179.1
1867 Male, age 76, both hemispheres 166.7
2137 Male, age 80, left hemisphere 158.5
2620 Female, age 94, left hemisphere 157.6
2861 Female, age 67, both hemispheres 154.9
Parahippocampal cortex
nTPM: 171.0
2692 Male, age 74, both hemispheres 178.7
2250 Female, age 67, right hemisphere 177.7
2018 Male, age 76, both hemispheres 176.2
1933 Female, age 85, both hemispheres 173.9
1990 Female, age 91, right hemisphere 171.7
1850 Male, age 80, both hemispheres 168.7
2532 Female, age 72, left hemisphere 167.8
2693 Female, age 94, both hemispheres 167.8
2245 Female, age 91, both hemispheres 166.3
2622 Female, age 67, right hemisphere 161.7
Perirhinal gyrus
nTPM: 164.0
1841 Female, age 85, right hemisphere 165.7
2521 Female, age 94, right hemisphere 165.6
1847 Female, age 91, left hemisphere 164.3
1794 Male, age 80, right hemisphere 163.2
2848 Male, age 76, right hemisphere 161.1
Subiculum
nTPM: 180.5
2729 Female, age 91, right hemisphere 196.5
2042 Male, age 76, both hemispheres 191.1
1901 Male, age 80, both hemispheres 177.7
2619 Male, age 74, both hemispheres 175.3
1977 Female, age 85, both hemispheres 172.2
2438 Female, age 94, left hemisphere 170.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 174.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 174.9
Samples: 197

Max nTPM: 367.9
Min nTPM: 68.5
Std nTPM: 51.5
Median nTPM: 164.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 367.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 356.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 302.8
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 290.3
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 281.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 271.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 268.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 265.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 262.0
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 256.0
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 253.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 169.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 169.7
FF:10153-102I9 76 years, female 191.0
FF:10169-103B7 60 years, female 148.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 73.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 73.3
Samples: 4

Max nTPM: 93.4
Min nTPM: 53.2
Sample A Female 93.4
Sample B Female 67.8
Sample C Male 78.6
Sample D Male 53.2
Entorhinal cortex
nTPM: 58.6
Samples: 4

Max nTPM: 68.2
Min nTPM: 48.5
Sample A Female 55.5
Sample B Female 68.2
Sample C Male 62.3
Sample D Male 48.5
Subiculum
nTPM: 68.6
Samples: 4

Max nTPM: 79.2
Min nTPM: 59.1
Sample A Female 79.2
Sample B Female 72.5
Sample C Male 63.4
Sample D Male 59.1
Ventral hippocampus
nTPM: 72.4
Samples: 4

Max nTPM: 84.5
Min nTPM: 62.5
Sample A Female 69.7
Sample B Female 62.5
Sample C Male 84.5
Sample D Male 72.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.0
Samples: 4

Max nTPM: 18.1
Min nTPM: 11.5
Sample A Male 16.8
Sample B Male 13.5
Sample C Female 11.5
Sample D Female 18.1
Hippocampal formation
nTPM: 11.5
Samples: 4

Max nTPM: 14.0
Min nTPM: 9.7
Sample A Male 12.2
Sample B Male 9.9
Sample C Female 14.0
Sample D Female 9.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
69816834 Antisense, RP_050510_02_A03, Mouse strain C57BL/6J (56 days, male) 0.9
Hippocampal formation
Expression energy: 0.9
69816834 Antisense, RP_050510_02_A03, Mouse strain C57BL/6J (56 days, male) 0.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.