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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:82.2 nTPM
HPA:82.2 nTPM
GTEx:66.4 nTPM
FANTOM5:180.1 Scaled Tags Per Million
Pig:40.8 nTPM
Mouse:33.4 nTPM
Allen mouse:16.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041506Antibody HPA043391
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 82.2
Sample id Sample description nTPM
Hippocampus
nTPM: 79.7
2621 Female, age 67, right hemisphere 87.8
1855 Male, age 76, left hemisphere 82.8
2148 Female, age 91, left hemisphere 79.7
1911 Female, age 85, right hemisphere 77.1
2529 Female, age 94, left hemisphere 76.7
1898 Male, age 80, left hemisphere 74.1
Dentate gyrus
nTPM: 78.5
2531 Female, age 67, both hemispheres 84.2
2246 Female, age 85, both hemispheres 80.3
1927 Female, age 91, both hemispheres 78.1
2530 Female, age 94, left hemisphere 77.5
2528 Male, age 74, both hemispheres 76.2
2010 Male, age 76, both hemispheres 74.9
Entorhinal gyrus
nTPM: 80.7
2613 Female, age 94, left hemisphere 88.6
2686 Male, age 75, right hemisphere 82.5
2764 Male, age 80, right hemisphere 81.4
1787 Male, age 76, left hemisphere 80.9
1938 Female, age 85, left hemisphere 75.8
2117 Female, age 91, right hemisphere 75.1
Hippocampus, CA1
nTPM: 76.9
2045 Male, age 76, both hemispheres 77.8
2749 Male, age 80, left hemisphere 76.9
2527 Male, age 74, both hemispheres 76.8
1873 Female, age 85, both hemispheres 76.7
2082 Female, age 91, right hemisphere 76.1
Hippocampus, CA2
nTPM: 77.8
1892 Male, age 76, both hemispheres 81.4
1940 Female, age 85, left hemisphere 81.4
2437 Female, age 94, left hemisphere 79.9
1963 Male, age 80, left hemisphere 75.6
2113 Female, age 91, right hemisphere 75.5
2249 Male, age 74, both hemispheres 72.9
Hippocampus, CA3
nTPM: 82.2
2620 Female, age 94, left hemisphere 92.7
2861 Female, age 67, both hemispheres 88.2
1891 Female, age 85, both hemispheres 79.9
1867 Male, age 76, both hemispheres 78.2
2137 Male, age 80, left hemisphere 77.6
2436 Male, age 74, both hemispheres 76.9
Parahippocampal cortex
nTPM: 80.9
2622 Female, age 67, right hemisphere 90.5
2692 Male, age 74, both hemispheres 84.3
2532 Female, age 72, left hemisphere 83.7
2245 Female, age 91, both hemispheres 82.2
2693 Female, age 94, both hemispheres 80.3
2250 Female, age 67, right hemisphere 78.7
1850 Male, age 80, both hemispheres 78.4
1990 Female, age 91, right hemisphere 77.6
2018 Male, age 76, both hemispheres 77.6
1933 Female, age 85, both hemispheres 76.2
Perirhinal gyrus
nTPM: 79.2
2521 Female, age 94, right hemisphere 81.0
2848 Male, age 76, right hemisphere 80.5
1794 Male, age 80, right hemisphere 78.7
1847 Female, age 91, left hemisphere 78.1
1841 Female, age 85, right hemisphere 77.8
Subiculum
nTPM: 81.1
2438 Female, age 94, left hemisphere 92.3
2619 Male, age 74, both hemispheres 82.9
2042 Male, age 76, both hemispheres 79.9
1901 Male, age 80, both hemispheres 77.6
1977 Female, age 85, both hemispheres 77.4
2729 Female, age 91, right hemisphere 76.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 66.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 66.4
Samples: 197

Max nTPM: 131.8
Min nTPM: 28.1
Std nTPM: 18.0
Median nTPM: 64.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 131.8
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 112.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 108.7
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 108.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 107.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 107.5
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 107.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 105.9
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 105.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 104.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 101.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 180.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 180.1
FF:10169-103B7 60 years, female 182.0
FF:10153-102I9 76 years, female 178.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 40.9
Samples: 4

Max nTPM: 46.5
Min nTPM: 36.0
Sample A Female 46.5
Sample B Female 38.1
Sample C Male 42.8
Sample D Male 36.0
Entorhinal cortex
nTPM: 40.0
Samples: 4

Max nTPM: 46.2
Min nTPM: 34.2
Sample A Female 46.2
Sample B Female 34.2
Sample C Male 39.5
Sample D Male 40.0
Subiculum
nTPM: 38.7
Samples: 4

Max nTPM: 49.5
Min nTPM: 31.5
Sample A Female 49.5
Sample B Female 31.5
Sample C Male 39.7
Sample D Male 33.9
Ventral hippocampus
nTPM: 40.1
Samples: 4

Max nTPM: 50.9
Min nTPM: 27.9
Sample A Female 37.7
Sample B Female 27.9
Sample C Male 50.9
Sample D Male 44.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.3
Samples: 4

Max nTPM: 34.7
Min nTPM: 30.3
Sample A Male 34.7
Sample B Male 32.1
Sample C Female 30.3
Sample D Female 32.0
Hippocampal formation
nTPM: 33.4
Samples: 4

Max nTPM: 36.0
Min nTPM: 28.8
Sample A Male 34.6
Sample B Male 36.0
Sample C Female 28.8
Sample D Female 34.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.6
68797948 Antisense, RP_050215_01_E01, Mouse strain C57BL/6J (56 days, male) 16.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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