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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:191.5 nTPM
HPA:191.5 nTPM
GTEx:146.1 nTPM
FANTOM5:256.3 Scaled Tags Per Million
Pig:98.4 nTPM
Mouse:104.0 nTPM
Allen mouse:5.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043028Antibody CAB009968
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 191.5
Sample id Sample description nTPM
Hippocampus
nTPM: 177.3
1911 Female, age 85, right hemisphere 190.5
2148 Female, age 91, left hemisphere 179.0
2529 Female, age 94, left hemisphere 178.7
1855 Male, age 76, left hemisphere 173.5
1898 Male, age 80, left hemisphere 172.0
2621 Female, age 67, right hemisphere 169.9
Dentate gyrus
nTPM: 179.2
2010 Male, age 76, both hemispheres 200.6
2528 Male, age 74, both hemispheres 189.2
2246 Female, age 85, both hemispheres 178.4
1927 Female, age 91, both hemispheres 173.1
2530 Female, age 94, left hemisphere 172.0
2531 Female, age 67, both hemispheres 161.9
Entorhinal gyrus
nTPM: 174.7
2117 Female, age 91, right hemisphere 190.7
2764 Male, age 80, right hemisphere 182.7
2613 Female, age 94, left hemisphere 173.5
1938 Female, age 85, left hemisphere 169.2
2686 Male, age 75, right hemisphere 169.0
1787 Male, age 76, left hemisphere 163.3
Hippocampus, CA1
nTPM: 184.6
2045 Male, age 76, both hemispheres 205.9
1873 Female, age 85, both hemispheres 187.9
2527 Male, age 74, both hemispheres 180.7
2082 Female, age 91, right hemisphere 180.3
2749 Male, age 80, left hemisphere 168.4
Hippocampus, CA2
nTPM: 182.4
2249 Male, age 74, both hemispheres 190.1
1940 Female, age 85, left hemisphere 188.8
1963 Male, age 80, left hemisphere 186.8
2113 Female, age 91, right hemisphere 180.8
1892 Male, age 76, both hemispheres 177.5
2437 Female, age 94, left hemisphere 170.3
Hippocampus, CA3
nTPM: 177.1
1891 Female, age 85, both hemispheres 205.1
1867 Male, age 76, both hemispheres 199.6
2436 Male, age 74, both hemispheres 174.1
2620 Female, age 94, left hemisphere 171.4
2137 Male, age 80, left hemisphere 160.5
2861 Female, age 67, both hemispheres 152.0
Parahippocampal cortex
nTPM: 175.9
2018 Male, age 76, both hemispheres 192.1
2692 Male, age 74, both hemispheres 191.3
1990 Female, age 91, right hemisphere 178.5
1850 Male, age 80, both hemispheres 178.4
2693 Female, age 94, both hemispheres 178.3
1933 Female, age 85, both hemispheres 173.1
2250 Female, age 67, right hemisphere 172.8
2532 Female, age 72, left hemisphere 171.4
2245 Female, age 91, both hemispheres 165.0
2622 Female, age 67, right hemisphere 158.2
Perirhinal gyrus
nTPM: 167.5
2521 Female, age 94, right hemisphere 175.1
1841 Female, age 85, right hemisphere 169.4
1794 Male, age 80, right hemisphere 165.7
2848 Male, age 76, right hemisphere 165.0
1847 Female, age 91, left hemisphere 162.4
Subiculum
nTPM: 191.5
2042 Male, age 76, both hemispheres 219.0
1901 Male, age 80, both hemispheres 195.1
2619 Male, age 74, both hemispheres 188.9
2729 Female, age 91, right hemisphere 188.8
1977 Female, age 85, both hemispheres 182.1
2438 Female, age 94, left hemisphere 175.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 146.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 146.1
Samples: 197

Max nTPM: 760.9
Min nTPM: 40.9
Std nTPM: 73.5
Median nTPM: 128.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 760.9
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 390.6
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 370.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 363.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 352.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 293.0
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 282.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 281.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 279.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 278.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 271.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 256.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 256.3
FF:10153-102I9 76 years, female 292.9
FF:10169-103B7 60 years, female 219.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 98.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 98.4
Samples: 4

Max nTPM: 109.7
Min nTPM: 84.8
Sample A Female 109.0
Sample B Female 90.0
Sample C Male 109.7
Sample D Male 84.8
Entorhinal cortex
nTPM: 86.7
Samples: 4

Max nTPM: 93.6
Min nTPM: 79.4
Sample A Female 79.4
Sample B Female 92.5
Sample C Male 93.6
Sample D Male 81.2
Subiculum
nTPM: 92.6
Samples: 4

Max nTPM: 96.4
Min nTPM: 90.2
Sample A Female 96.4
Sample B Female 93.2
Sample C Male 90.5
Sample D Male 90.2
Ventral hippocampus
nTPM: 92.3
Samples: 4

Max nTPM: 96.9
Min nTPM: 85.1
Sample A Female 95.6
Sample B Female 85.1
Sample C Male 96.9
Sample D Male 91.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 104.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 88.9
Samples: 4

Max nTPM: 101.9
Min nTPM: 67.2
Sample A Male 87.2
Sample B Male 101.9
Sample C Female 99.4
Sample D Female 67.2
Hippocampal formation
nTPM: 104.0
Samples: 4

Max nTPM: 109.4
Min nTPM: 98.6
Sample A Male 109.4
Sample B Male 98.6
Sample C Female 101.1
Sample D Female 106.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.9
67978473 Antisense, RP_040923_01_B10, Mouse strain C57BL/6J (56 days, male) 11.7
71991953 Antisense, RP_051012_03_G11, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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