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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:344.8 nTPM
HPA:344.8 nTPM
GTEx:336.2 nTPM
FANTOM5:72.7 Scaled Tags Per Million
Pig:102.8 nTPM
Mouse:58.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042575
Glial cells Not detected
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 344.8
Sample id Sample description nTPM
Hippocampus
nTPM: 344.8
1898 Male, age 80, left hemisphere 356.1
2621 Female, age 67, right hemisphere 350.0
2148 Female, age 91, left hemisphere 345.2
1911 Female, age 85, right hemisphere 341.9
2529 Female, age 94, left hemisphere 337.9
1855 Male, age 76, left hemisphere 337.7
Dentate gyrus
nTPM: 323.7
2531 Female, age 67, both hemispheres 339.2
2528 Male, age 74, both hemispheres 329.6
2246 Female, age 85, both hemispheres 325.2
1927 Female, age 91, both hemispheres 322.2
2010 Male, age 76, both hemispheres 313.6
2530 Female, age 94, left hemisphere 312.3
Entorhinal gyrus
nTPM: 333.1
1938 Female, age 85, left hemisphere 341.8
2764 Male, age 80, right hemisphere 339.3
2686 Male, age 75, right hemisphere 338.7
2117 Female, age 91, right hemisphere 336.1
1787 Male, age 76, left hemisphere 324.6
2613 Female, age 94, left hemisphere 317.9
Hippocampus, CA1
nTPM: 324.5
2527 Male, age 74, both hemispheres 339.2
1873 Female, age 85, both hemispheres 336.3
2082 Female, age 91, right hemisphere 328.3
2045 Male, age 76, both hemispheres 319.7
2749 Male, age 80, left hemisphere 299.1
Hippocampus, CA2
nTPM: 321.0
1963 Male, age 80, left hemisphere 334.0
2113 Female, age 91, right hemisphere 333.4
2437 Female, age 94, left hemisphere 319.5
1940 Female, age 85, left hemisphere 315.6
1892 Male, age 76, both hemispheres 314.5
2249 Male, age 74, both hemispheres 308.8
Hippocampus, CA3
nTPM: 331.4
2861 Female, age 67, both hemispheres 415.9
1891 Female, age 85, both hemispheres 338.9
1867 Male, age 76, both hemispheres 320.1
2620 Female, age 94, left hemisphere 318.2
2137 Male, age 80, left hemisphere 298.5
2436 Male, age 74, both hemispheres 296.7
Parahippocampal cortex
nTPM: 333.3
2622 Female, age 67, right hemisphere 369.7
2692 Male, age 74, both hemispheres 350.4
1933 Female, age 85, both hemispheres 339.6
2532 Female, age 72, left hemisphere 332.8
2245 Female, age 91, both hemispheres 331.4
2018 Male, age 76, both hemispheres 324.5
2693 Female, age 94, both hemispheres 323.7
1850 Male, age 80, both hemispheres 323.4
2250 Female, age 67, right hemisphere 322.7
1990 Female, age 91, right hemisphere 315.0
Perirhinal gyrus
nTPM: 322.0
1847 Female, age 91, left hemisphere 332.2
1794 Male, age 80, right hemisphere 330.4
1841 Female, age 85, right hemisphere 321.9
2521 Female, age 94, right hemisphere 314.5
2848 Male, age 76, right hemisphere 311.1
Subiculum
nTPM: 327.8
2619 Male, age 74, both hemispheres 358.2
2729 Female, age 91, right hemisphere 346.5
1977 Female, age 85, both hemispheres 324.1
1901 Male, age 80, both hemispheres 316.8
2042 Male, age 76, both hemispheres 315.3
2438 Female, age 94, left hemisphere 306.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 336.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 336.2
Samples: 197

Max nTPM: 1183.9
Min nTPM: 27.1
Std nTPM: 168.8
Median nTPM: 307.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 1183.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1036.9
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 877.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 781.1
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 767.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 745.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 743.9
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 735.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 688.4
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 683.2
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 671.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 72.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 72.7
FF:10153-102I9 76 years, female 95.2
FF:10169-103B7 60 years, female 50.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 102.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 86.9
Samples: 4

Max nTPM: 106.7
Min nTPM: 65.7
Sample A Female 103.1
Sample B Female 71.9
Sample C Male 106.7
Sample D Male 65.7
Entorhinal cortex
nTPM: 102.8
Samples: 4

Max nTPM: 136.9
Min nTPM: 83.8
Sample A Female 89.6
Sample B Female 100.8
Sample C Male 136.9
Sample D Male 83.8
Subiculum
nTPM: 94.0
Samples: 4

Max nTPM: 118.8
Min nTPM: 84.6
Sample A Female 118.8
Sample B Female 86.4
Sample C Male 84.6
Sample D Male 86.0
Ventral hippocampus
nTPM: 88.1
Samples: 4

Max nTPM: 121.3
Min nTPM: 72.4
Sample A Female 78.5
Sample B Female 72.4
Sample C Male 121.3
Sample D Male 80.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.4
Samples: 4

Max nTPM: 60.8
Min nTPM: 54.1
Sample A Male 59.1
Sample B Male 59.7
Sample C Female 60.8
Sample D Female 54.1
Hippocampal formation
nTPM: 56.2
Samples: 4

Max nTPM: 72.4
Min nTPM: 48.2
Sample A Male 52.3
Sample B Male 52.0
Sample C Female 48.2
Sample D Female 72.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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