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NTSR2
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:84.2 nTPM
HPA:84.2 nTPM
GTEx:114.3 nTPM
FANTOM5:101.1 Scaled Tags Per Million
Pig:20.2 nTPM
Mouse:121.9 nTPM
Allen mouse:0.1 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 84.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 73.0
2481 Female, age 94, left hemisphere 82.4
2290 Female, age 72, unknown 82.2
1854 Male, age 80, left hemisphere 79.7
1857 Female, age 85, left hemisphere 77.3
2289 Male, age 61, right hemisphere 74.0
2288 Male, age 75, left hemisphere 67.1
1781 Male, age 74, unknown 61.8
2846 Female, age 79, unknown 59.3
Claustrum
nTPM: 53.3
2196 Female, age 79, unknown 61.9
2491 Male, age 75, both hemispheres 56.9
2198 Male, age 80, both hemispheres 54.3
2392 Female, age 94, both hemispheres 52.7
2645 Female, age 72, unknown 52.2
2284 Female, age 91, both hemispheres 51.8
1956 Male, age 74, unknown 51.0
2568 Male, age 61, both hemispheres 50.4
2292 Female, age 85, both hemispheres 48.7
Globus pallidus, externus
nTPM: 84.2
1996 Male, age 80, right hemisphere 104.2
2646 Male, age 61, right hemisphere 100.8
2772 Female, age 79, unknown 80.4
2567 Female, age 72, unknown 72.5
2395 Male, age 75, both hemispheres 63.2
Globus pallidus, internus
nTPM: 79.4
2037 Male, age 80, right hemisphere 93.5
2483 Female, age 94, right hemisphere 90.4
1818 Male, age 74, unknown 87.8
2287 Male, age 75, right hemisphere 81.4
2566 Female, age 72, unknown 72.4
2778 Female, age 91, both hemispheres 68.0
2111 Female, age 85, right hemisphere 62.6
Nucleus accumbens
nTPM: 71.5
1806 Female, age 85, left hemisphere 81.4
2698 Female, age 72, unknown 77.1
2286 Male, age 75, left hemisphere 74.3
2732 Male, age 80, right hemisphere 72.9
1783 Male, age 74, unknown 70.1
1856 Female, age 91, right hemisphere 68.6
2824 Male, age 61, right hemisphere 66.8
2391 Female, age 94, left hemisphere 60.7
Nucleus basalis of Meynert
nTPM: 70.7
2569 Male, age 61, both hemispheres 102.7
2484 Female, age 94, left hemisphere 64.2
2393 Male, age 80, right hemisphere 59.9
2821 Male, age 75, both hemispheres 56.3
Nucleus of the diagonal band
nTPM: 64.3
1979 Male, age 74, unknown 76.9
2195 Female, age 85, both hemispheres 65.9
2775 Male, age 80, right hemisphere 63.3
1812 Female, age 91, both hemispheres 60.8
2029 Male, age 61, right hemisphere 54.6
Olfactory tubercle
nTPM: 59.3
2856 Male, age 75, right hemisphere 61.6
1846 Male, age 80, right hemisphere 60.7
2487 Female, age 94, left hemisphere 58.4
1998 Female, age 91, both hemispheres 56.5
Putamen
nTPM: 63.6
2482 Female, age 94, left hemisphere 70.1
1838 Male, age 80, right hemisphere 69.7
1937 Female, age 91, right hemisphere 65.4
2489 Female, age 72, unknown 61.6
1829 Male, age 74, unknown 61.3
2647 Male, age 75, left hemisphere 58.9
2466 Female, age 79, unknown 58.3
Septal nuclei
nTPM: 65.5
2059 Female, age 85, both hemispheres 82.4
2199 Male, age 80, right hemisphere 72.9
2394 Male, age 61, left hemisphere 65.7
1960 Male, age 74, unknown 63.7
2009 Female, age 91, both hemispheres 59.4
2031 Female, age 72, unknown 57.7
2629 Female, age 94, right hemisphere 57.1

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 114.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 92.0
Samples: 246

Max nTPM: 335.8
Min nTPM: 5.3
Std nTPM: 47.4
Median nTPM: 82.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 335.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 278.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 248.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 248.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 236.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 226.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 206.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 201.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 198.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 195.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 194.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 114.3
Samples: 246

Max nTPM: 542.4
Min nTPM: 17.5
Std nTPM: 67.9
Median nTPM: 95.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 542.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 399.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 331.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 306.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 305.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 285.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 269.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 266.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 263.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 250.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 248.3
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Brain - Putamen (basal ganglia)
Average nTPM: 79.5
Samples: 205

Max nTPM: 222.0
Min nTPM: 10.8
Std nTPM: 40.3
Median nTPM: 73.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 222.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 218.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 213.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 187.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 183.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 178.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 176.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 169.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 165.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 164.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 162.6
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 101.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 101.1
FF:10164-103B2 76 years, female 101.1
Globus pallidus
Scaled Tags Per Million: 48.3
FF:10175-103C4 60 years, female 48.9
FF:10161-103A8 76 years, female 47.7
Nucleus accumbens
Scaled Tags Per Million: 56.4
FF:10037-101F1 23-56 years, mixed 56.4
Putamen
Scaled Tags Per Million: 92.8
FF:10176-103C5 60 years, female 92.8

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 20.2
Pig sample Sample description nTPM
Caudate
nTPM: 10.0
Samples: 4

Max nTPM: 11.9
Min nTPM: 7.7
Sample A Female 7.7
Sample B Female 10.6
Sample C Male 11.9
Sample D Male 9.7
Putamen
nTPM: 20.2
Samples: 4

Max nTPM: 26.3
Min nTPM: 15.2
Sample A Female 26.3
Sample B Female 15.2
Sample C Male 23.5
Sample D Male 15.7
Septum
nTPM: 9.7
Samples: 4

Max nTPM: 10.9
Min nTPM: 8.2
Sample A Female 10.0
Sample B Female 8.2
Sample C Male 10.9
Sample D Male 9.5
Ventral pallidum
nTPM: 12.6
Samples: 4

Max nTPM: 19.3
Min nTPM: 7.3
Sample A Female 7.3
Sample B Female 14.6
Sample C Male 19.3
Sample D Male 9.3

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 121.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 121.9
Samples: 4

Max nTPM: 129.3
Min nTPM: 112.3
Sample A Male 117.2
Sample B Male 129.3
Sample C Female 112.3
Sample D Female 128.9
Septum
nTPM: 105.3
Samples: 4

Max nTPM: 110.7
Min nTPM: 99.8
Sample A Male 99.8
Sample B Male 100.5
Sample C Female 110.7
Sample D Female 110.0
Ventral forebrain
nTPM: 114.8
Samples: 4

Max nTPM: 137.4
Min nTPM: 101.2
Sample A Male 101.2
Sample B Male 114.4
Sample C Female 137.4
Sample D Female 106.3

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
81600566 Antisense, RP_080625_04_G09, Mouse strain C57BL/6J (56 days, male) 0.2
100145352 Antisense, RP_110519_02_H04, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.1
81600566 Antisense, RP_080625_04_G09, Mouse strain C57BL/6J (56 days, male) 0.2
100145352 Antisense, RP_110519_02_H04, Mouse strain C57BL/6J (56 days, male) 0.0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.