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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:12.2 nTPM
HPA:12.2 nTPM
GTEx:16.6 nTPM
FANTOM5:31.0 Scaled Tags Per Million
Pig:12.7 nTPM
Mouse:11.0 nTPM
Allen mouse:5.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030187
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.2
Sample id Sample description nTPM
Hippocampus
nTPM: 11.3
1855 Male, age 76, left hemisphere 14.1
2621 Female, age 67, right hemisphere 11.2
2529 Female, age 94, left hemisphere 10.9
2148 Female, age 91, left hemisphere 10.7
1898 Male, age 80, left hemisphere 10.6
1911 Female, age 85, right hemisphere 10.5
Dentate gyrus
nTPM: 10.6
2010 Male, age 76, both hemispheres 12.4
2531 Female, age 67, both hemispheres 11.5
2530 Female, age 94, left hemisphere 10.6
1927 Female, age 91, both hemispheres 10.4
2246 Female, age 85, both hemispheres 9.6
2528 Male, age 74, both hemispheres 9.3
Entorhinal gyrus
nTPM: 11.1
2613 Female, age 94, left hemisphere 12.3
1787 Male, age 76, left hemisphere 11.6
1938 Female, age 85, left hemisphere 11.5
2686 Male, age 75, right hemisphere 10.7
2764 Male, age 80, right hemisphere 10.6
2117 Female, age 91, right hemisphere 10.1
Hippocampus, CA1
nTPM: 12.0
2749 Male, age 80, left hemisphere 16.8
2045 Male, age 76, both hemispheres 13.0
1873 Female, age 85, both hemispheres 10.6
2527 Male, age 74, both hemispheres 10.0
2082 Female, age 91, right hemisphere 9.4
Hippocampus, CA2
nTPM: 10.1
1963 Male, age 80, left hemisphere 11.1
1892 Male, age 76, both hemispheres 10.9
2113 Female, age 91, right hemisphere 9.8
2437 Female, age 94, left hemisphere 9.8
2249 Male, age 74, both hemispheres 9.7
1940 Female, age 85, left hemisphere 9.4
Hippocampus, CA3
nTPM: 12.2
2620 Female, age 94, left hemisphere 16.9
2137 Male, age 80, left hemisphere 14.0
1867 Male, age 76, both hemispheres 12.3
2861 Female, age 67, both hemispheres 11.2
1891 Female, age 85, both hemispheres 9.9
2436 Male, age 74, both hemispheres 8.8
Parahippocampal cortex
nTPM: 10.4
2018 Male, age 76, both hemispheres 11.7
2245 Female, age 91, both hemispheres 11.5
2692 Male, age 74, both hemispheres 11.2
1990 Female, age 91, right hemisphere 10.6
2622 Female, age 67, right hemisphere 10.3
1933 Female, age 85, both hemispheres 10.1
2250 Female, age 67, right hemisphere 10.0
2532 Female, age 72, left hemisphere 10.0
1850 Male, age 80, both hemispheres 9.8
2693 Female, age 94, both hemispheres 8.7
Perirhinal gyrus
nTPM: 9.9
1847 Female, age 91, left hemisphere 10.6
2521 Female, age 94, right hemisphere 10.5
2848 Male, age 76, right hemisphere 10.5
1794 Male, age 80, right hemisphere 9.6
1841 Female, age 85, right hemisphere 8.5
Subiculum
nTPM: 10.5
2042 Male, age 76, both hemispheres 13.9
1901 Male, age 80, both hemispheres 11.0
2619 Male, age 74, both hemispheres 10.9
1977 Female, age 85, both hemispheres 9.4
2438 Female, age 94, left hemisphere 9.3
2729 Female, age 91, right hemisphere 8.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.6
Samples: 197

Max nTPM: 51.6
Min nTPM: 8.0
Std nTPM: 5.2
Median nTPM: 15.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 51.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 34.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 33.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 30.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 29.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 29.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 29.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 28.5
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 25.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 24.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 24.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.0
FF:10169-103B7 60 years, female 33.4
FF:10153-102I9 76 years, female 28.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.8
Samples: 4

Max nTPM: 15.4
Min nTPM: 9.3
Sample A Female 15.4
Sample B Female 10.0
Sample C Male 12.6
Sample D Male 9.3
Entorhinal cortex
nTPM: 8.3
Samples: 4

Max nTPM: 9.9
Min nTPM: 7.4
Sample A Female 8.3
Sample B Female 7.4
Sample C Male 9.9
Sample D Male 7.4
Subiculum
nTPM: 10.0
Samples: 4

Max nTPM: 13.2
Min nTPM: 7.8
Sample A Female 13.2
Sample B Female 7.8
Sample C Male 10.1
Sample D Male 9.0
Ventral hippocampus
nTPM: 12.7
Samples: 4

Max nTPM: 17.5
Min nTPM: 8.9
Sample A Female 14.0
Sample B Female 8.9
Sample C Male 17.5
Sample D Male 10.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.0
Samples: 4

Max nTPM: 12.0
Min nTPM: 9.0
Sample A Male 9.0
Sample B Male 9.9
Sample C Female 12.0
Sample D Female 9.2
Hippocampal formation
nTPM: 11.1
Samples: 4

Max nTPM: 12.2
Min nTPM: 10.3
Sample A Male 10.6
Sample B Male 10.3
Sample C Female 12.2
Sample D Female 11.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
73716662 Antisense, RP_051206_03_E10, Mouse strain C57BL/6J (56 days, male) 5.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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