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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:72.2 nTPM
HPA:72.2 nTPM
GTEx:92.5 nTPM
FANTOM5:30.0 Scaled Tags Per Million
Pig:29.7 nTPM
Mouse:30.2 nTPM
Allen mouse:3.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038246
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 72.2
Sample id Sample description nTPM
Hippocampus
nTPM: 69.7
1855 Male, age 76, left hemisphere 71.5
2621 Female, age 67, right hemisphere 71.3
1898 Male, age 80, left hemisphere 70.6
1911 Female, age 85, right hemisphere 69.0
2148 Female, age 91, left hemisphere 68.8
2529 Female, age 94, left hemisphere 67.0
Dentate gyrus
nTPM: 70.3
2010 Male, age 76, both hemispheres 74.1
2530 Female, age 94, left hemisphere 73.1
1927 Female, age 91, both hemispheres 70.9
2531 Female, age 67, both hemispheres 70.8
2246 Female, age 85, both hemispheres 67.3
2528 Male, age 74, both hemispheres 65.8
Entorhinal gyrus
nTPM: 67.8
2613 Female, age 94, left hemisphere 73.7
2764 Male, age 80, right hemisphere 70.5
2686 Male, age 75, right hemisphere 67.8
1787 Male, age 76, left hemisphere 67.1
2117 Female, age 91, right hemisphere 64.1
1938 Female, age 85, left hemisphere 63.6
Hippocampus, CA1
nTPM: 72.2
2749 Male, age 80, left hemisphere 87.4
2045 Male, age 76, both hemispheres 72.4
1873 Female, age 85, both hemispheres 70.0
2527 Male, age 74, both hemispheres 65.9
2082 Female, age 91, right hemisphere 65.3
Hippocampus, CA2
nTPM: 68.2
1963 Male, age 80, left hemisphere 77.2
1892 Male, age 76, both hemispheres 70.7
2113 Female, age 91, right hemisphere 68.3
1940 Female, age 85, left hemisphere 64.9
2437 Female, age 94, left hemisphere 64.7
2249 Male, age 74, both hemispheres 63.5
Hippocampus, CA3
nTPM: 71.7
2137 Male, age 80, left hemisphere 82.8
2861 Female, age 67, both hemispheres 77.3
2620 Female, age 94, left hemisphere 71.1
1867 Male, age 76, both hemispheres 69.6
1891 Female, age 85, both hemispheres 67.5
2436 Male, age 74, both hemispheres 61.7
Parahippocampal cortex
nTPM: 65.9
2018 Male, age 76, both hemispheres 69.4
1850 Male, age 80, both hemispheres 69.1
2532 Female, age 72, left hemisphere 67.2
2622 Female, age 67, right hemisphere 66.8
1990 Female, age 91, right hemisphere 66.4
2692 Male, age 74, both hemispheres 65.0
2693 Female, age 94, both hemispheres 64.9
2245 Female, age 91, both hemispheres 64.2
2250 Female, age 67, right hemisphere 63.0
1933 Female, age 85, both hemispheres 62.6
Perirhinal gyrus
nTPM: 67.2
2521 Female, age 94, right hemisphere 70.3
1794 Male, age 80, right hemisphere 70.0
1847 Female, age 91, left hemisphere 67.2
1841 Female, age 85, right hemisphere 65.9
2848 Male, age 76, right hemisphere 62.9
Subiculum
nTPM: 66.4
2042 Male, age 76, both hemispheres 69.8
1901 Male, age 80, both hemispheres 69.3
2729 Female, age 91, right hemisphere 68.9
1977 Female, age 85, both hemispheres 65.0
2619 Male, age 74, both hemispheres 62.8
2438 Female, age 94, left hemisphere 62.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 92.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 92.5
Samples: 197

Max nTPM: 166.6
Min nTPM: 46.4
Std nTPM: 22.9
Median nTPM: 92.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 166.6
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 158.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 149.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 144.6
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 139.9
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 138.9
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 136.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 136.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 135.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 131.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 130.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 30.0
FF:10169-103B7 60 years, female 33.4
FF:10153-102I9 76 years, female 26.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.6
Samples: 4

Max nTPM: 29.7
Min nTPM: 22.9
Sample A Female 29.7
Sample B Female 29.6
Sample C Male 24.0
Sample D Male 22.9
Entorhinal cortex
nTPM: 29.7
Samples: 4

Max nTPM: 33.5
Min nTPM: 24.9
Sample A Female 33.5
Sample B Female 28.7
Sample C Male 31.8
Sample D Male 24.9
Subiculum
nTPM: 24.8
Samples: 4

Max nTPM: 29.8
Min nTPM: 22.6
Sample A Female 29.8
Sample B Female 22.6
Sample C Male 24.1
Sample D Male 22.6
Ventral hippocampus
nTPM: 25.9
Samples: 4

Max nTPM: 30.5
Min nTPM: 20.6
Sample A Female 23.6
Sample B Female 20.6
Sample C Male 30.5
Sample D Male 28.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.2
Samples: 4

Max nTPM: 34.4
Min nTPM: 28.1
Sample A Male 29.4
Sample B Male 28.9
Sample C Female 28.1
Sample D Female 34.4
Hippocampal formation
nTPM: 29.5
Samples: 4

Max nTPM: 31.7
Min nTPM: 27.0
Sample A Male 28.4
Sample B Male 30.9
Sample C Female 31.7
Sample D Female 27.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.9
68919904 Antisense, RP_050301_02_G04, Mouse strain C57BL/6J (56 days, male) 3.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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