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NSMCE1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:57.4 nTPM
HPA:57.4 nTPM
GTEx:45.6 nTPM
FANTOM5:22.3 Scaled Tags Per Million
Pig:26.7 nTPM
Mouse:27.6 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041567Antibody HPA043091
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 57.4
Sample id Sample description nTPM
Hippocampus
nTPM: 56.8
1898 Male, age 80, left hemisphere 59.9
2529 Female, age 94, left hemisphere 58.9
1911 Female, age 85, right hemisphere 55.9
2148 Female, age 91, left hemisphere 55.9
2621 Female, age 67, right hemisphere 55.3
1855 Male, age 76, left hemisphere 54.9
Dentate gyrus
nTPM: 56.6
2530 Female, age 94, left hemisphere 58.9
1927 Female, age 91, both hemispheres 56.9
2010 Male, age 76, both hemispheres 56.7
2528 Male, age 74, both hemispheres 56.4
2246 Female, age 85, both hemispheres 56.3
2531 Female, age 67, both hemispheres 54.2
Entorhinal gyrus
nTPM: 56.3
2117 Female, age 91, right hemisphere 58.8
1938 Female, age 85, left hemisphere 58.1
2764 Male, age 80, right hemisphere 57.2
1787 Male, age 76, left hemisphere 56.1
2613 Female, age 94, left hemisphere 53.9
2686 Male, age 75, right hemisphere 53.9
Hippocampus, CA1
nTPM: 56.9
1873 Female, age 85, both hemispheres 59.2
2527 Male, age 74, both hemispheres 57.6
2749 Male, age 80, left hemisphere 57.5
2082 Female, age 91, right hemisphere 56.0
2045 Male, age 76, both hemispheres 54.4
Hippocampus, CA2
nTPM: 57.4
2249 Male, age 74, both hemispheres 59.2
1892 Male, age 76, both hemispheres 58.8
1963 Male, age 80, left hemisphere 58.1
1940 Female, age 85, left hemisphere 56.5
2113 Female, age 91, right hemisphere 56.4
2437 Female, age 94, left hemisphere 55.8
Hippocampus, CA3
nTPM: 56.4
2436 Male, age 74, both hemispheres 58.3
1867 Male, age 76, both hemispheres 56.9
1891 Female, age 85, both hemispheres 56.8
2620 Female, age 94, left hemisphere 56.7
2137 Male, age 80, left hemisphere 56.2
2861 Female, age 67, both hemispheres 53.6
Parahippocampal cortex
nTPM: 56.2
1933 Female, age 85, both hemispheres 58.7
2250 Female, age 67, right hemisphere 58.3
1850 Male, age 80, both hemispheres 57.8
2692 Male, age 74, both hemispheres 57.3
1990 Female, age 91, right hemisphere 57.1
2245 Female, age 91, both hemispheres 56.2
2532 Female, age 72, left hemisphere 55.5
2018 Male, age 76, both hemispheres 54.2
2622 Female, age 67, right hemisphere 53.4
2693 Female, age 94, both hemispheres 53.1
Perirhinal gyrus
nTPM: 56.8
1794 Male, age 80, right hemisphere 58.3
1847 Female, age 91, left hemisphere 57.5
1841 Female, age 85, right hemisphere 57.4
2848 Male, age 76, right hemisphere 55.8
2521 Female, age 94, right hemisphere 55.1
Subiculum
nTPM: 57.2
1977 Female, age 85, both hemispheres 58.3
1901 Male, age 80, both hemispheres 57.9
2619 Male, age 74, both hemispheres 57.5
2438 Female, age 94, left hemisphere 57.3
2042 Male, age 76, both hemispheres 56.8
2729 Female, age 91, right hemisphere 55.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.6
Samples: 197

Max nTPM: 79.5
Min nTPM: 27.8
Std nTPM: 8.3
Median nTPM: 44.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 79.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 72.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 71.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 66.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 63.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 62.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 62.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 62.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 61.6
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 60.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 59.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.3
FF:10169-103B7 60 years, female 24.0
FF:10153-102I9 76 years, female 20.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 26.7
Samples: 4

Max nTPM: 32.6
Min nTPM: 22.2
Sample A Female 32.6
Sample B Female 24.3
Sample C Male 27.7
Sample D Male 22.2
Entorhinal cortex
nTPM: 22.9
Samples: 4

Max nTPM: 24.9
Min nTPM: 18.9
Sample A Female 24.5
Sample B Female 24.9
Sample C Male 23.3
Sample D Male 18.9
Subiculum
nTPM: 21.9
Samples: 4

Max nTPM: 29.8
Min nTPM: 18.3
Sample A Female 29.8
Sample B Female 19.0
Sample C Male 20.6
Sample D Male 18.3
Ventral hippocampus
nTPM: 25.1
Samples: 4

Max nTPM: 29.7
Min nTPM: 20.8
Sample A Female 24.6
Sample B Female 20.8
Sample C Male 29.7
Sample D Male 25.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.2
Samples: 4

Max nTPM: 28.8
Min nTPM: 22.7
Sample A Male 23.1
Sample B Male 22.7
Sample C Female 28.8
Sample D Female 26.3
Hippocampal formation
nTPM: 27.6
Samples: 4

Max nTPM: 31.2
Min nTPM: 23.5
Sample A Male 31.2
Sample B Male 24.9
Sample C Female 23.5
Sample D Female 30.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
68637515 Antisense, RP_050126_01_A10, Mouse strain C57BL/6J (56 days, male) 0.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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