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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:40.1 nTPM
HPA:40.1 nTPM
GTEx:32.6 nTPM
FANTOM5:44.1 Scaled Tags Per Million
Pig:14.7 nTPM
Mouse:35.9 nTPM
Allen mouse:2.8 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 40.1
Sample id Sample description nTPM
Amygdala
nTPM: 40.1
2695 Female, age 67, right hemisphere 41.4
1987 Female, age 91, left hemisphere 40.6
2517 Female, age 94, left hemisphere 39.8
2514 Male, age 75, right hemisphere 39.4
2814 Male, age 76, right hemisphere 39.4
Basal amygdala
nTPM: 38.5
2609 Male, age 75, right hemisphere 40.9
2110 Male, age 80, left hemisphere 39.2
2685 Female, age 94, left hemisphere 39.1
1955 Male, age 76, both hemispheres 37.5
2827 Female, age 67, right hemisphere 37.3
2243 Female, age 91, right hemisphere 37.2
Central amygdala
nTPM: 39.7
2826 Female, age 94, left hemisphere 42.3
1905 Male, age 76, both hemispheres 40.0
2515 Male, age 75, right hemisphere 39.0
2239 Male, age 80, left hemisphere 38.8
2701 Female, age 91, right hemisphere 38.5
Corticomedial amygdala
nTPM: 38.3
2829 Male, age 80, left hemisphere 39.6
2535 Female, age 67, right hemisphere 39.1
2428 Male, age 75, right hemisphere 38.6
2242 Female, age 91, right hemisphere 38.4
2429 Female, age 94, left hemisphere 37.4
2240 Male, age 76, both hemispheres 36.3
Lateral amygdala
nTPM: 39.8
2534 Female, age 94, left hemisphere 41.5
2830 Female, age 67, right hemisphere 40.1
2256 Male, age 80, left hemisphere 39.8
2516 Male, age 75, right hemisphere 39.6
1883 Male, age 76, both hemispheres 39.2
2255 Female, age 91, right hemisphere 38.6
Stria terminalis, bed nucleus
nTPM: 37.6
1974 Female, age 91, both hemispheres 37.9
2201 Male, age 74, unknown 37.7
2486 Female, age 94, both hemispheres 37.3

AMYGDALA - GTEx RNA-seqi
Average nTPM 32.6
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 32.6
Samples: 152

Max nTPM: 93.8
Min nTPM: 16.1
Std nTPM: 8.3
Median nTPM: 31.0
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 93.8
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 58.7
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 55.7
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 54.0
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 50.0
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 49.7
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 46.9
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 45.9
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 43.6
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 43.3
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 42.7
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 44.1
FF:10151-102I7 76 years, female 44.1

AMYGDALA - Pig RNA-seqi
Average nTPM 14.7
Pig sample Sample description nTPM
Amygdala
nTPM: 14.7
Samples: 4

Max nTPM: 18.8
Min nTPM: 12.3
Sample A Female 18.8
Sample B Female 13.7
Sample C Male 13.9
Sample D Male 12.3

AMYGDALA - Mouse RNA-seqi
Average nTPM 35.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 35.9
Samples: 4

Max nTPM: 37.7
Min nTPM: 33.9
Sample A Male 35.0
Sample B Male 33.9
Sample C Female 37.7
Sample D Female 37.1

AMYGDALA - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 2.8
73718047 Antisense, RP_051121_04_C01, Mouse strain C57BL/6J (56 days, male) 3.8
68924449 Antisense, RP_050303_02_D04, Mouse strain C57BL/6J (56 days, male) 1.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.