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RAB24
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:30.1 nTPM
HPA:30.1 nTPM
GTEx:29.6 nTPM
FANTOM5:25.2 Scaled Tags Per Million
Pig:14.4 nTPM
Mouse:51.4 nTPM
Allen mouse:6.3 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 30.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 26.5
1854 Male, age 80, left hemisphere 27.4
2290 Female, age 72, unknown 27.4
2288 Male, age 75, left hemisphere 27.1
1781 Male, age 74, unknown 27.0
1857 Female, age 85, left hemisphere 26.3
2481 Female, age 94, left hemisphere 25.8
2846 Female, age 79, unknown 25.7
2289 Male, age 61, right hemisphere 24.9
Claustrum
nTPM: 27.3
2491 Male, age 75, both hemispheres 29.6
2198 Male, age 80, both hemispheres 28.7
2284 Female, age 91, both hemispheres 28.5
2568 Male, age 61, both hemispheres 27.8
2645 Female, age 72, unknown 26.6
1956 Male, age 74, unknown 26.4
2196 Female, age 79, unknown 26.2
2392 Female, age 94, both hemispheres 26.2
2292 Female, age 85, both hemispheres 25.7
Globus pallidus, externus
nTPM: 24.3
2772 Female, age 79, unknown 25.4
2395 Male, age 75, both hemispheres 25.0
2567 Female, age 72, unknown 24.2
1996 Male, age 80, right hemisphere 23.6
2646 Male, age 61, right hemisphere 23.6
Globus pallidus, internus
nTPM: 25.1
2287 Male, age 75, right hemisphere 27.1
2483 Female, age 94, right hemisphere 26.4
2566 Female, age 72, unknown 25.6
2778 Female, age 91, both hemispheres 24.9
2037 Male, age 80, right hemisphere 24.7
1818 Male, age 74, unknown 24.3
2111 Female, age 85, right hemisphere 22.6
Nucleus accumbens
nTPM: 26.1
1856 Female, age 91, right hemisphere 28.4
1783 Male, age 74, unknown 28.0
1806 Female, age 85, left hemisphere 27.0
2824 Male, age 61, right hemisphere 25.9
2286 Male, age 75, left hemisphere 25.8
2698 Female, age 72, unknown 25.7
2391 Female, age 94, left hemisphere 24.2
2732 Male, age 80, right hemisphere 24.1
Nucleus basalis of Meynert
nTPM: 25.0
2821 Male, age 75, both hemispheres 26.1
2484 Female, age 94, left hemisphere 25.7
2393 Male, age 80, right hemisphere 24.4
2569 Male, age 61, both hemispheres 24.0
Nucleus of the diagonal band
nTPM: 29.7
2775 Male, age 80, right hemisphere 33.4
1812 Female, age 91, both hemispheres 31.1
2029 Male, age 61, right hemisphere 29.1
2195 Female, age 85, both hemispheres 28.4
1979 Male, age 74, unknown 26.3
Olfactory tubercle
nTPM: 30.1
1998 Female, age 91, both hemispheres 32.2
2487 Female, age 94, left hemisphere 30.9
1846 Male, age 80, right hemisphere 30.7
2856 Male, age 75, right hemisphere 26.6
Putamen
nTPM: 26.4
2647 Male, age 75, left hemisphere 27.7
1838 Male, age 80, right hemisphere 27.6
1937 Female, age 91, right hemisphere 27.6
2466 Female, age 79, unknown 27.1
2482 Female, age 94, left hemisphere 25.6
2489 Female, age 72, unknown 24.9
1829 Male, age 74, unknown 24.6
Septal nuclei
nTPM: 27.8
1960 Male, age 74, unknown 32.0
2031 Female, age 72, unknown 30.6
2629 Female, age 94, right hemisphere 28.3
2009 Female, age 91, both hemispheres 28.0
2059 Female, age 85, both hemispheres 26.6
2199 Male, age 80, right hemisphere 25.0
2394 Male, age 61, left hemisphere 24.3

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 29.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 25.9
Samples: 246

Max nTPM: 56.5
Min nTPM: 10.3
Std nTPM: 8.0
Median nTPM: 24.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 56.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 45.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 45.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 44.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 43.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 42.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 42.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 41.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 40.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 40.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 40.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 29.6
Samples: 246

Max nTPM: 55.1
Min nTPM: 9.6
Std nTPM: 8.0
Median nTPM: 29.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 55.1
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 51.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 51.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 48.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 47.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 47.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 47.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 46.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 43.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 43.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 43.6
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Brain - Putamen (basal ganglia)
Average nTPM: 26.2
Samples: 205

Max nTPM: 48.0
Min nTPM: 13.2
Std nTPM: 7.3
Median nTPM: 25.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 48.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 47.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 44.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 43.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 43.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 42.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 41.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 41.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 41.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 41.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 41.3
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 25.2
FF:10164-103B2 76 years, female 25.2
Globus pallidus
Scaled Tags Per Million: 12.9
FF:10161-103A8 76 years, female 17.1
FF:10175-103C4 60 years, female 8.6
Nucleus accumbens
Scaled Tags Per Million: 18.8
FF:10037-101F1 23-56 years, mixed 18.8
Putamen
Scaled Tags Per Million: 25.1
FF:10176-103C5 60 years, female 25.1

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 14.4
Pig sample Sample description nTPM
Caudate
nTPM: 14.4
Samples: 4

Max nTPM: 17.7
Min nTPM: 12.2
Sample A Female 13.3
Sample B Female 14.4
Sample C Male 17.7
Sample D Male 12.2
Putamen
nTPM: 14.2
Samples: 4

Max nTPM: 18.6
Min nTPM: 10.7
Sample A Female 10.7
Sample B Female 11.8
Sample C Male 18.6
Sample D Male 15.5
Septum
nTPM: 13.6
Samples: 4

Max nTPM: 14.4
Min nTPM: 12.7
Sample A Female 14.4
Sample B Female 12.9
Sample C Male 14.2
Sample D Male 12.7
Ventral pallidum
nTPM: 12.9
Samples: 4

Max nTPM: 15.5
Min nTPM: 10.5
Sample A Female 12.3
Sample B Female 15.5
Sample C Male 13.2
Sample D Male 10.5

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 51.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 51.5
Samples: 4

Max nTPM: 54.4
Min nTPM: 47.6
Sample A Male 49.9
Sample B Male 53.9
Sample C Female 54.4
Sample D Female 47.6
Septum
nTPM: 46.3
Samples: 4

Max nTPM: 51.1
Min nTPM: 42.6
Sample A Male 47.6
Sample B Male 51.1
Sample C Female 43.7
Sample D Female 42.6
Ventral forebrain
nTPM: 50.2
Samples: 4

Max nTPM: 55.7
Min nTPM: 47.0
Sample A Male 55.7
Sample B Male 51.0
Sample C Female 47.0
Sample D Female 47.2

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 6.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 6.3
68341842 Antisense, RP_041207_02_C09, Mouse strain C57BL/6J (56 days, male) 6.3
Pallidum
Expression energy: 5.9
68341842 Antisense, RP_041207_02_C09, Mouse strain C57BL/6J (56 days, male) 5.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.