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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:10.3 nTPM
HPA:10.3 nTPM
GTEx:5.6 nTPM
FANTOM5:6.3 Scaled Tags Per Million
Mouse:6.6 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.3
Sample id Sample description nTPM
Hippocampus
nTPM: 9.9
1855 Male, age 76, left hemisphere 10.2
2529 Female, age 94, left hemisphere 10.2
2621 Female, age 67, right hemisphere 10.0
1898 Male, age 80, left hemisphere 9.8
2148 Female, age 91, left hemisphere 9.7
1911 Female, age 85, right hemisphere 9.5
Dentate gyrus
nTPM: 9.8
2530 Female, age 94, left hemisphere 10.2
2528 Male, age 74, both hemispheres 9.9
2531 Female, age 67, both hemispheres 9.8
1927 Female, age 91, both hemispheres 9.7
2010 Male, age 76, both hemispheres 9.7
2246 Female, age 85, both hemispheres 9.5
Entorhinal gyrus
nTPM: 9.9
2686 Male, age 75, right hemisphere 10.5
1787 Male, age 76, left hemisphere 10.4
2117 Female, age 91, right hemisphere 10.3
1938 Female, age 85, left hemisphere 9.9
2613 Female, age 94, left hemisphere 9.3
2764 Male, age 80, right hemisphere 9.3
Hippocampus, CA1
nTPM: 9.5
2045 Male, age 76, both hemispheres 9.9
2527 Male, age 74, both hemispheres 9.6
2082 Female, age 91, right hemisphere 9.5
1873 Female, age 85, both hemispheres 9.4
2749 Male, age 80, left hemisphere 9.1
Hippocampus, CA2
nTPM: 10.3
1892 Male, age 76, both hemispheres 11.4
1940 Female, age 85, left hemisphere 11.2
2437 Female, age 94, left hemisphere 11.1
2113 Female, age 91, right hemisphere 9.7
2249 Male, age 74, both hemispheres 9.4
1963 Male, age 80, left hemisphere 9.1
Hippocampus, CA3
nTPM: 10.2
1867 Male, age 76, both hemispheres 12.8
1891 Female, age 85, both hemispheres 10.1
2436 Male, age 74, both hemispheres 10.0
2861 Female, age 67, both hemispheres 9.9
2620 Female, age 94, left hemisphere 9.4
2137 Male, age 80, left hemisphere 9.1
Parahippocampal cortex
nTPM: 10.1
2532 Female, age 72, left hemisphere 10.7
1933 Female, age 85, both hemispheres 10.4
2245 Female, age 91, both hemispheres 10.3
2622 Female, age 67, right hemisphere 10.3
1850 Male, age 80, both hemispheres 10.2
1990 Female, age 91, right hemisphere 10.2
2018 Male, age 76, both hemispheres 9.8
2250 Female, age 67, right hemisphere 9.7
2693 Female, age 94, both hemispheres 9.6
2692 Male, age 74, both hemispheres 9.5
Perirhinal gyrus
nTPM: 10.3
1794 Male, age 80, right hemisphere 10.4
2521 Female, age 94, right hemisphere 10.4
1841 Female, age 85, right hemisphere 10.3
1847 Female, age 91, left hemisphere 10.2
2848 Male, age 76, right hemisphere 10.1
Subiculum
nTPM: 10.1
2438 Female, age 94, left hemisphere 11.6
1977 Female, age 85, both hemispheres 10.1
2729 Female, age 91, right hemisphere 9.8
1901 Male, age 80, both hemispheres 9.6
2042 Male, age 76, both hemispheres 9.6
2619 Male, age 74, both hemispheres 9.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 5.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 5.6
Samples: 197

Max nTPM: 49.2
Min nTPM: 0.0
Std nTPM: 5.2
Median nTPM: 4.4
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 49.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 27.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 22.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 22.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 21.0
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 17.4
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 16.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 16.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 15.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 14.7
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 13.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 6.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 6.3
FF:10169-103B7 60 years, female 10.4
FF:10153-102I9 76 years, female 2.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.6
Samples: 4

Max nTPM: 6.6
Min nTPM: 4.3
Sample A Male 6.6
Sample B Male 4.3
Sample C Female 6.3
Sample D Female 5.2
Hippocampal formation
nTPM: 6.6
Samples: 4

Max nTPM: 7.4
Min nTPM: 5.9
Sample A Male 7.2
Sample B Male 5.9
Sample C Female 7.4
Sample D Female 5.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
69261424 Antisense, RP_050208_01_E01, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.