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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:17.1 nTPM
HPA:17.1 nTPM
GTEx:14.2 nTPM
FANTOM5:34.9 Scaled Tags Per Million
Pig:15.2 nTPM
Mouse:28.9 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042567
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.1
Sample id Sample description nTPM
Hippocampus
nTPM: 16.3
1898 Male, age 80, left hemisphere 16.9
1911 Female, age 85, right hemisphere 16.9
2529 Female, age 94, left hemisphere 16.7
1855 Male, age 76, left hemisphere 16.0
2621 Female, age 67, right hemisphere 15.9
2148 Female, age 91, left hemisphere 15.8
Dentate gyrus
nTPM: 16.2
2528 Male, age 74, both hemispheres 16.6
1927 Female, age 91, both hemispheres 16.4
2010 Male, age 76, both hemispheres 16.4
2246 Female, age 85, both hemispheres 16.3
2530 Female, age 94, left hemisphere 15.8
2531 Female, age 67, both hemispheres 15.6
Entorhinal gyrus
nTPM: 16.1
2117 Female, age 91, right hemisphere 17.5
1938 Female, age 85, left hemisphere 16.6
2686 Male, age 75, right hemisphere 16.2
1787 Male, age 76, left hemisphere 15.8
2764 Male, age 80, right hemisphere 15.8
2613 Female, age 94, left hemisphere 14.8
Hippocampus, CA1
nTPM: 16.4
2527 Male, age 74, both hemispheres 16.8
2045 Male, age 76, both hemispheres 16.5
1873 Female, age 85, both hemispheres 16.4
2749 Male, age 80, left hemisphere 16.3
2082 Female, age 91, right hemisphere 15.9
Hippocampus, CA2
nTPM: 16.4
1892 Male, age 76, both hemispheres 16.8
2249 Male, age 74, both hemispheres 16.5
1963 Male, age 80, left hemisphere 16.4
2113 Female, age 91, right hemisphere 16.4
1940 Female, age 85, left hemisphere 16.2
2437 Female, age 94, left hemisphere 16.0
Hippocampus, CA3
nTPM: 16.2
1891 Female, age 85, both hemispheres 17.4
1867 Male, age 76, both hemispheres 17.0
2137 Male, age 80, left hemisphere 16.2
2620 Female, age 94, left hemisphere 15.7
2436 Male, age 74, both hemispheres 15.5
2861 Female, age 67, both hemispheres 15.2
Parahippocampal cortex
nTPM: 16.4
1933 Female, age 85, both hemispheres 17.3
1850 Male, age 80, both hemispheres 17.2
2692 Male, age 74, both hemispheres 16.7
1990 Female, age 91, right hemisphere 16.6
2018 Male, age 76, both hemispheres 16.4
2693 Female, age 94, both hemispheres 16.4
2250 Female, age 67, right hemisphere 16.2
2532 Female, age 72, left hemisphere 16.2
2245 Female, age 91, both hemispheres 16.1
2622 Female, age 67, right hemisphere 15.0
Perirhinal gyrus
nTPM: 17.1
1841 Female, age 85, right hemisphere 17.5
2521 Female, age 94, right hemisphere 17.4
1794 Male, age 80, right hemisphere 17.1
2848 Male, age 76, right hemisphere 16.8
1847 Female, age 91, left hemisphere 16.5
Subiculum
nTPM: 16.4
1901 Male, age 80, both hemispheres 17.0
2438 Female, age 94, left hemisphere 16.8
1977 Female, age 85, both hemispheres 16.4
2042 Male, age 76, both hemispheres 16.4
2729 Female, age 91, right hemisphere 16.4
2619 Male, age 74, both hemispheres 15.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.2
Samples: 197

Max nTPM: 25.5
Min nTPM: 8.7
Std nTPM: 3.0
Median nTPM: 13.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 25.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 22.6
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 22.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 21.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 21.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 20.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 20.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 20.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 20.6
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 20.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 20.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.9
FF:10153-102I9 76 years, female 35.3
FF:10169-103B7 60 years, female 34.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.2
Samples: 4

Max nTPM: 16.6
Min nTPM: 12.0
Sample A Female 16.5
Sample B Female 15.8
Sample C Male 16.6
Sample D Male 12.0
Entorhinal cortex
nTPM: 14.9
Samples: 4

Max nTPM: 16.0
Min nTPM: 13.2
Sample A Female 14.5
Sample B Female 16.0
Sample C Male 15.9
Sample D Male 13.2
Subiculum
nTPM: 14.3
Samples: 4

Max nTPM: 15.6
Min nTPM: 13.3
Sample A Female 15.6
Sample B Female 14.3
Sample C Male 13.3
Sample D Male 14.0
Ventral hippocampus
nTPM: 13.3
Samples: 4

Max nTPM: 16.0
Min nTPM: 11.3
Sample A Female 12.2
Sample B Female 11.3
Sample C Male 13.6
Sample D Male 16.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 28.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.6
Samples: 4

Max nTPM: 30.7
Min nTPM: 24.2
Sample A Male 30.7
Sample B Male 29.8
Sample C Female 24.2
Sample D Female 29.6
Hippocampal formation
nTPM: 28.9
Samples: 4

Max nTPM: 34.9
Min nTPM: 18.6
Sample A Male 34.9
Sample B Male 18.6
Sample C Female 32.6
Sample D Female 29.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
69442467 Antisense, RP_050414_03_D01, Mouse strain C57BL/6J (56 days, male) 1.0

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