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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:19.4 nTPM
HPA:19.4 nTPM
GTEx:14.4 nTPM
FANTOM5:115.1 Scaled Tags Per Million
Pig:5.6 nTPM
Mouse:43.3 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047415
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.4
Sample id Sample description nTPM
Hippocampus
nTPM: 19.4
1898 Male, age 80, left hemisphere 21.0
2148 Female, age 91, left hemisphere 19.9
2529 Female, age 94, left hemisphere 19.0
2621 Female, age 67, right hemisphere 19.0
1911 Female, age 85, right hemisphere 18.8
1855 Male, age 76, left hemisphere 18.6
Dentate gyrus
nTPM: 18.4
2530 Female, age 94, left hemisphere 20.0
2010 Male, age 76, both hemispheres 18.6
2528 Male, age 74, both hemispheres 18.6
2246 Female, age 85, both hemispheres 18.3
2531 Female, age 67, both hemispheres 17.6
1927 Female, age 91, both hemispheres 17.3
Entorhinal gyrus
nTPM: 18.5
2117 Female, age 91, right hemisphere 20.5
2613 Female, age 94, left hemisphere 20.5
1787 Male, age 76, left hemisphere 18.5
2686 Male, age 75, right hemisphere 18.0
1938 Female, age 85, left hemisphere 17.9
2764 Male, age 80, right hemisphere 15.9
Hippocampus, CA1
nTPM: 18.8
2527 Male, age 74, both hemispheres 20.3
2749 Male, age 80, left hemisphere 19.5
1873 Female, age 85, both hemispheres 18.6
2045 Male, age 76, both hemispheres 18.0
2082 Female, age 91, right hemisphere 17.3
Hippocampus, CA2
nTPM: 16.5
2249 Male, age 74, both hemispheres 19.6
2437 Female, age 94, left hemisphere 18.0
2113 Female, age 91, right hemisphere 16.8
1963 Male, age 80, left hemisphere 16.3
1940 Female, age 85, left hemisphere 14.8
1892 Male, age 76, both hemispheres 13.6
Hippocampus, CA3
nTPM: 17.4
2137 Male, age 80, left hemisphere 20.4
1891 Female, age 85, both hemispheres 18.2
2436 Male, age 74, both hemispheres 17.6
2861 Female, age 67, both hemispheres 16.5
2620 Female, age 94, left hemisphere 16.3
1867 Male, age 76, both hemispheres 15.5
Parahippocampal cortex
nTPM: 17.5
2250 Female, age 67, right hemisphere 21.4
1850 Male, age 80, both hemispheres 18.6
2245 Female, age 91, both hemispheres 18.6
2532 Female, age 72, left hemisphere 18.0
2018 Male, age 76, both hemispheres 17.3
2692 Male, age 74, both hemispheres 17.3
1990 Female, age 91, right hemisphere 17.1
1933 Female, age 85, both hemispheres 16.7
2693 Female, age 94, both hemispheres 15.5
2622 Female, age 67, right hemisphere 14.7
Perirhinal gyrus
nTPM: 18.0
1841 Female, age 85, right hemisphere 20.9
1847 Female, age 91, left hemisphere 19.7
1794 Male, age 80, right hemisphere 17.5
2521 Female, age 94, right hemisphere 17.5
2848 Male, age 76, right hemisphere 14.5
Subiculum
nTPM: 17.5
2729 Female, age 91, right hemisphere 20.1
1977 Female, age 85, both hemispheres 18.2
2042 Male, age 76, both hemispheres 17.1
2619 Male, age 74, both hemispheres 17.1
1901 Male, age 80, both hemispheres 16.5
2438 Female, age 94, left hemisphere 15.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.4
Samples: 197

Max nTPM: 85.4
Min nTPM: 6.1
Std nTPM: 10.5
Median nTPM: 11.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 85.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 77.0
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 71.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 65.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 43.9
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 38.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 37.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 35.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 32.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 32.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 32.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 115.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 115.1
FF:10169-103B7 60 years, female 169.5
FF:10153-102I9 76 years, female 60.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.6
Samples: 4

Max nTPM: 6.0
Min nTPM: 5.0
Sample A Female 6.0
Sample B Female 5.9
Sample C Male 5.4
Sample D Male 5.0
Entorhinal cortex
nTPM: 4.6
Samples: 4

Max nTPM: 4.9
Min nTPM: 4.4
Sample A Female 4.4
Sample B Female 4.9
Sample C Male 4.5
Sample D Male 4.7
Subiculum
nTPM: 4.5
Samples: 4

Max nTPM: 4.6
Min nTPM: 4.1
Sample A Female 4.6
Sample B Female 4.6
Sample C Male 4.6
Sample D Male 4.1
Ventral hippocampus
nTPM: 5.0
Samples: 4

Max nTPM: 5.3
Min nTPM: 4.6
Sample A Female 5.3
Sample B Female 4.6
Sample C Male 5.2
Sample D Male 4.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 33.3
Samples: 4

Max nTPM: 35.0
Min nTPM: 32.0
Sample A Male 32.7
Sample B Male 33.4
Sample C Female 35.0
Sample D Female 32.0
Hippocampal formation
nTPM: 43.3
Samples: 4

Max nTPM: 50.8
Min nTPM: 38.2
Sample A Male 38.2
Sample B Male 44.7
Sample C Female 50.8
Sample D Female 39.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
69080019 Antisense, RP_050324_01_D09, Mouse strain C57BL/6J (56 days, male) 6.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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