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FRMPD4
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:4.5 nTPM
HPA:4.5 nTPM
GTEx:4.6 nTPM
FANTOM5:34.2 Scaled Tags Per Million
Pig:13.0 nTPM
Mouse:24.7 nTPM
Allen mouse:3.0 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 4.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 0.4
1781 Male, age 74, unknown 1.6
2290 Female, age 72, unknown 1.2
2846 Female, age 79, unknown 0.6
1857 Female, age 85, left hemisphere 0.1
1854 Male, age 80, left hemisphere 0.0
2288 Male, age 75, left hemisphere 0.0
2289 Male, age 61, right hemisphere 0.0
2481 Female, age 94, left hemisphere 0.0
Claustrum
nTPM: 0.3
2392 Female, age 94, both hemispheres 1.7
2491 Male, age 75, both hemispheres 1.1
2198 Male, age 80, both hemispheres 0.2
1956 Male, age 74, unknown 0.1
2196 Female, age 79, unknown 0.0
2284 Female, age 91, both hemispheres 0.0
2292 Female, age 85, both hemispheres 0.0
2568 Male, age 61, both hemispheres 0.0
2645 Female, age 72, unknown 0.0
Globus pallidus, externus
nTPM: 0.0
1996 Male, age 80, right hemisphere 0.0
2395 Male, age 75, both hemispheres 0.0
2567 Female, age 72, unknown 0.0
2646 Male, age 61, right hemisphere 0.0
2772 Female, age 79, unknown 0.0
Globus pallidus, internus
nTPM: 0.0
1818 Male, age 74, unknown 0.0
2037 Male, age 80, right hemisphere 0.0
2111 Female, age 85, right hemisphere 0.0
2287 Male, age 75, right hemisphere 0.0
2483 Female, age 94, right hemisphere 0.0
2566 Female, age 72, unknown 0.0
2778 Female, age 91, both hemispheres 0.0
Nucleus accumbens
nTPM: 0.4
1856 Female, age 91, right hemisphere 1.5
2824 Male, age 61, right hemisphere 1.2
1783 Male, age 74, unknown 1.0
1806 Female, age 85, left hemisphere 0.0
2286 Male, age 75, left hemisphere 0.0
2391 Female, age 94, left hemisphere 0.0
2698 Female, age 72, unknown 0.0
2732 Male, age 80, right hemisphere 0.0
Nucleus basalis of Meynert
nTPM: 0.0
2393 Male, age 80, right hemisphere 0.0
2484 Female, age 94, left hemisphere 0.0
2569 Male, age 61, both hemispheres 0.0
2821 Male, age 75, both hemispheres 0.0
Nucleus of the diagonal band
nTPM: 4.2
2029 Male, age 61, right hemisphere 6.9
2775 Male, age 80, right hemisphere 5.6
1812 Female, age 91, both hemispheres 5.0
2195 Female, age 85, both hemispheres 3.6
1979 Male, age 74, unknown 0.0
Olfactory tubercle
nTPM: 4.5
2487 Female, age 94, left hemisphere 6.6
1998 Female, age 91, both hemispheres 5.5
2856 Male, age 75, right hemisphere 3.6
1846 Male, age 80, right hemisphere 2.3
Putamen
nTPM: 0.2
2466 Female, age 79, unknown 1.0
1838 Male, age 80, right hemisphere 0.4
1829 Male, age 74, unknown 0.0
1937 Female, age 91, right hemisphere 0.0
2482 Female, age 94, left hemisphere 0.0
2489 Female, age 72, unknown 0.0
2647 Male, age 75, left hemisphere 0.0
Septal nuclei
nTPM: 2.3
2031 Female, age 72, unknown 5.1
1960 Male, age 74, unknown 4.4
2629 Female, age 94, right hemisphere 3.7
2009 Female, age 91, both hemispheres 2.7
2059 Female, age 85, both hemispheres 0.1
2199 Male, age 80, right hemisphere 0.0
2394 Male, age 61, left hemisphere 0.0

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 4.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 3.7
Samples: 246

Max nTPM: 13.5
Min nTPM: 0.2
Std nTPM: 2.6
Median nTPM: 3.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 13.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 13.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 12.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 11.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 10.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 10.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 10.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 9.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 9.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 8.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 8.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 4.6
Samples: 246

Max nTPM: 15.1
Min nTPM: 0.2
Std nTPM: 2.8
Median nTPM: 4.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 15.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 12.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 11.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 10.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 10.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 10.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 10.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 10.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 10.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 10.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 9.7
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Brain - Putamen (basal ganglia)
Average nTPM: 2.8
Samples: 205

Max nTPM: 10.5
Min nTPM: 0.0
Std nTPM: 2.0
Median nTPM: 2.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 10.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 8.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 8.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 7.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 7.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 6.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 6.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 6.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 6.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 6.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 6.3
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 24.5
FF:10164-103B2 76 years, female 24.5
Globus pallidus
Scaled Tags Per Million: 8.4
FF:10175-103C4 60 years, female 14.2
FF:10161-103A8 76 years, female 2.7
Nucleus accumbens
Scaled Tags Per Million: 34.2
FF:10037-101F1 23-56 years, mixed 34.2
Putamen
Scaled Tags Per Million: 31.2
FF:10176-103C5 60 years, female 31.2

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 13.0
Pig sample Sample description nTPM
Caudate
nTPM: 13.0
Samples: 4

Max nTPM: 16.0
Min nTPM: 10.9
Sample A Female 11.6
Sample B Female 10.9
Sample C Male 16.0
Sample D Male 13.5
Putamen
nTPM: 11.5
Samples: 4

Max nTPM: 16.1
Min nTPM: 5.8
Sample A Female 5.8
Sample B Female 12.1
Sample C Male 16.1
Sample D Male 12.1
Septum
nTPM: 10.2
Samples: 4

Max nTPM: 12.3
Min nTPM: 5.8
Sample A Female 10.8
Sample B Female 11.9
Sample C Male 5.8
Sample D Male 12.3
Ventral pallidum
nTPM: 11.3
Samples: 4

Max nTPM: 13.7
Min nTPM: 9.1
Sample A Female 13.7
Sample B Female 11.6
Sample C Male 10.6
Sample D Male 9.1

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 24.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 22.5
Samples: 4

Max nTPM: 24.7
Min nTPM: 20.5
Sample A Male 24.7
Sample B Male 23.5
Sample C Female 20.5
Sample D Female 21.4
Septum
nTPM: 24.7
Samples: 4

Max nTPM: 27.3
Min nTPM: 21.7
Sample A Male 23.4
Sample B Male 27.3
Sample C Female 21.7
Sample D Female 26.2
Ventral forebrain
nTPM: 19.3
Samples: 4

Max nTPM: 22.6
Min nTPM: 17.0
Sample A Male 19.1
Sample B Male 22.6
Sample C Female 17.0
Sample D Female 18.4

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.0
70595913 Antisense, RP_050628_03_E09, Mouse strain C57BL/6J (56 days, male) 3.2
73931421 Antisense, RP_051214_04_F01, Mouse strain C57BL/6J (56 days, male) 2.9
Pallidum
Expression energy: 2.9
70595913 Antisense, RP_050628_03_E09, Mouse strain C57BL/6J (56 days, male) 3.3
73931421 Antisense, RP_051214_04_F01, Mouse strain C57BL/6J (56 days, male) 2.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.