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PDCD6IP
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:17.6 nTPM
HPA:17.6 nTPM
GTEx:20.8 nTPM
FANTOM5:52.0 Scaled Tags Per Million

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011905Antibody CAB016212
Glial cells Not detectedNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.6
Sample id Sample description nTPM
Hippocampus
nTPM: 15.3
1898 Male, age 80, left hemisphere 16.8
2529 Female, age 94, left hemisphere 15.7
1855 Male, age 76, left hemisphere 15.6
1911 Female, age 85, right hemisphere 15.2
2621 Female, age 67, right hemisphere 14.4
2148 Female, age 91, left hemisphere 14.2
Dentate gyrus
nTPM: 15.7
2528 Male, age 74, both hemispheres 18.9
1927 Female, age 91, both hemispheres 16.6
2010 Male, age 76, both hemispheres 16.5
2530 Female, age 94, left hemisphere 14.7
2246 Female, age 85, both hemispheres 14.3
2531 Female, age 67, both hemispheres 13.1
Entorhinal gyrus
nTPM: 15.3
1938 Female, age 85, left hemisphere 16.6
1787 Male, age 76, left hemisphere 15.9
2764 Male, age 80, right hemisphere 15.9
2117 Female, age 91, right hemisphere 15.5
2613 Female, age 94, left hemisphere 15.4
2686 Male, age 75, right hemisphere 12.6
Hippocampus, CA1
nTPM: 15.9
2749 Male, age 80, left hemisphere 19.5
1873 Female, age 85, both hemispheres 16.4
2527 Male, age 74, both hemispheres 15.8
2082 Female, age 91, right hemisphere 14.8
2045 Male, age 76, both hemispheres 13.1
Hippocampus, CA2
nTPM: 16.2
1892 Male, age 76, both hemispheres 17.7
1963 Male, age 80, left hemisphere 17.1
2249 Male, age 74, both hemispheres 16.8
1940 Female, age 85, left hemisphere 15.2
2437 Female, age 94, left hemisphere 15.2
2113 Female, age 91, right hemisphere 14.9
Hippocampus, CA3
nTPM: 15.5
2137 Male, age 80, left hemisphere 17.9
2436 Male, age 74, both hemispheres 16.0
1891 Female, age 85, both hemispheres 15.7
1867 Male, age 76, both hemispheres 15.6
2620 Female, age 94, left hemisphere 14.8
2861 Female, age 67, both hemispheres 13.1
Parahippocampal cortex
nTPM: 16.0
1850 Male, age 80, both hemispheres 18.4
2250 Female, age 67, right hemisphere 17.8
1990 Female, age 91, right hemisphere 17.5
2693 Female, age 94, both hemispheres 16.4
2532 Female, age 72, left hemisphere 16.3
2692 Male, age 74, both hemispheres 15.9
1933 Female, age 85, both hemispheres 15.8
2245 Female, age 91, both hemispheres 15.5
2018 Male, age 76, both hemispheres 13.5
2622 Female, age 67, right hemisphere 13.3
Perirhinal gyrus
nTPM: 17.6
1794 Male, age 80, right hemisphere 18.9
1847 Female, age 91, left hemisphere 18.6
2521 Female, age 94, right hemisphere 17.9
1841 Female, age 85, right hemisphere 17.0
2848 Male, age 76, right hemisphere 15.6
Subiculum
nTPM: 15.8
1901 Male, age 80, both hemispheres 17.2
2438 Female, age 94, left hemisphere 16.9
2619 Male, age 74, both hemispheres 16.1
1977 Female, age 85, both hemispheres 15.9
2042 Male, age 76, both hemispheres 14.6
2729 Female, age 91, right hemisphere 14.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.8
Samples: 197

Max nTPM: 37.2
Min nTPM: 13.1
Std nTPM: 3.9
Median nTPM: 20.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 37.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 34.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 32.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 32.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 31.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 30.7
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 29.4
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 28.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 28.2
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 28.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 28.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 52.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 52.0
FF:10169-103B7 60 years, female 60.6
FF:10153-102I9 76 years, female 43.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.