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TMED10
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:54.3 nTPM
HPA:54.3 nTPM
GTEx:45.7 nTPM
FANTOM5:197.8 Scaled Tags Per Million
Pig:138.3 nTPM
Mouse:104.9 nTPM
Allen mouse:9.6 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 54.3
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 51.2
1870 Female, age 42, unknown 58.4
2586 Male, age 75, left hemisphere 55.1
2411 Female, age 72, unknown 53.1
1833 Male, age 53, unknown 52.8
1830 Male, age 51, unknown 51.9
2019 Male, age 18, unknown 51.3
2666 Male, age 74, left hemisphere 49.8
2828 Female, age 72, unknown 49.3
1827 Male, age 72, unknown 48.2
2219 Male, age 76, both hemispheres 41.9
Dorsal raphe nucleus
nTPM: 52.3
2016 Female, age 72, unknown 57.3
1828 Male, age 53, unknown 52.5
2750 Male, age 76, both hemispheres 52.3
2298 Female, age 72, unknown 50.3
2047 Male, age 72, unknown 49.2
Inferior colliculus
nTPM: 51.0
2097 Female, age 72, unknown 53.0
1848 Female, age 42, unknown 50.8
1890 Male, age 53, unknown 50.7
2849 Male, age 72, unknown 49.4
Median raphe nucleus
nTPM: 50.4
2220 Male, age 76, midline 50.4
Pedunculopontine tegmental nucleus
nTPM: 50.6
2338 Male, age 61, both hemispheres 54.6
2334 Male, age 80, both hemispheres 50.0
1921 Female, age 85, both hemispheres 47.1
Periaquaductal grey, anterior
nTPM: 51.2
2502 Female, age 75, unknown 53.6
1947 Male, age 18, unknown 50.8
1795 Male, age 51, unknown 49.1
Periaquaductal grey, dorsal
nTPM: 54.3
2850 Male, age 76, both hemispheres 58.2
1840 Male, age 53, unknown 54.8
1831 Male, age 72, unknown 52.8
2464 Female, age 72, unknown 51.2
Periaquaductal grey, lateral
nTPM: 51.5
2140 Male, age 76, both hemispheres 54.0
2053 Male, age 18, unknown 51.6
2272 Male, age 74, both hemispheres 48.8
Pretectal area
nTPM: 50.1
2825 Male, age 18, unknown 53.6
2273 Male, age 74, both hemispheres 53.5
2224 Female, age 72, unknown 52.1
1815 Male, age 53, unknown 50.9
2407 Male, age 75, both hemispheres 50.8
2667 Female, age 75, unknown 50.4
2316 Male, age 76, right hemisphere 49.7
1817 Female, age 42, unknown 48.7
1944 Female, age 72, unknown 48.3
1816 Male, age 51, unknown 47.6
2007 Male, age 72, unknown 45.8
Red nucleus
nTPM: 53.4
1821 Female, age 72, unknown 58.0
1954 Female, age 42, unknown 57.1
1904 Male, age 53, unknown 56.0
1865 Male, age 51, unknown 55.3
2584 Male, age 75, left hemisphere 54.6
2227 Male, age 72, unknown 54.0
2769 Male, age 72, unknown 53.6
2823 Male, age 76, right hemisphere 52.7
2503 Female, age 72, unknown 52.3
2785 Male, age 18, unknown 50.6
2725 Female, age 75, unknown 50.4
2588 Male, age 74, left hemisphere 46.4
Substantia nigra
nTPM: 52.0
2241 Male, age 72, unknown 58.2
2590 Female, age 75, unknown 55.3
2409 Female, age 72, unknown 53.9
2699 Male, age 18, unknown 53.4
1851 Male, age 51, unknown 52.5
2583 Male, age 75, right hemisphere 51.8
1889 Female, age 72, unknown 49.4
1941 Male, age 53, unknown 48.9
2665 Male, age 74, both hemispheres 48.8
1916 Female, age 42, unknown 47.9
Superior colliculus
nTPM: 51.8
1995 Male, age 72, unknown 59.4
1913 Female, age 42, unknown 58.6
2664 Male, age 75, both hemispheres 53.4
1839 Male, age 51, unknown 53.0
2587 Male, age 74, left hemisphere 52.9
2261 Male, age 18, unknown 48.9
2087 Female, age 72, unknown 48.7
2668 Female, age 75, unknown 48.5
1895 Male, age 76, right hemisphere 47.8
1796 Male, age 53, unknown 47.1
Ventral tegmental area
nTPM: 51.8
2021 Male, age 53, unknown 53.8
2223 Female, age 72, unknown 53.4
1942 Male, age 51, unknown 51.5
1915 Female, age 42, unknown 51.4
2410 Female, age 72, unknown 51.0
2218 Male, age 76, both hemispheres 49.9

MIDBRAIN - GTEx RNA-seqi
Average nTPM 45.7
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 45.7
Samples: 139

Max nTPM: 75.9
Min nTPM: 29.0
Std nTPM: 10.1
Median nTPM: 43.7
GTEX-1LVAO-0011-R2a-SM-EYYX1 60-69 years, male 75.9
GTEX-1H3VE-0011-R2a-SM-CE6SA 40-49 years, male 68.5
GTEX-N7MT-0011-R2a-SM-2I3GI 60-69 years, female 68.3
GTEX-1J8Q2-0011-R2b-SM-EAZ2X 60-69 years, male 67.6
GTEX-UTHO-0011-R2A-SM-3GIKC 60-69 years, male 65.7
GTEX-1F48J-0011-R2a-SM-CL535 50-59 years, female 65.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z 60-69 years, male 65.5
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 64.1
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 63.7
GTEX-NPJ7-0011-R2a-SM-2I3GF 60-69 years, female 63.5
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 63.1
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 197.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 197.8
FF:10158-103A5 76 years, female 197.8

MIDBRAIN - Pig RNA-seqi
Average nTPM 138.3
Pig sample Sample description nTPM
Midbrain
nTPM: 138.3
Samples: 4

Max nTPM: 233.6
Min nTPM: 92.2
Sample A Female 233.6
Sample B Female 129.2
Sample C Male 98.1
Sample D Male 92.2
Periaqueductal gray
nTPM: 104.5
Samples: 3

Max nTPM: 114.2
Min nTPM: 97.7
Sample B Female 114.2
Sample C Male 97.7
Sample D Male 101.6
Substantia nigra
nTPM: 123.3
Samples: 4

Max nTPM: 138.7
Min nTPM: 107.5
Sample A Female 135.7
Sample B Female 111.2
Sample C Male 107.5
Sample D Male 138.7
Superior colliculi
nTPM: 117.1
Samples: 4

Max nTPM: 123.9
Min nTPM: 110.9
Sample A Female 123.9
Sample B Female 110.9
Sample C Male 119.2
Sample D Male 114.2

MIDBRAIN - Mouse RNA-seqi
Average nTPM 104.9
Mouse sample Sample description nTPM
Midbrain
nTPM: 104.9
Samples: 4

Max nTPM: 110.2
Min nTPM: 97.6
Sample A Male 110.2
Sample B Male 105.8
Sample C Female 97.6
Sample D Female 105.9

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 9.6
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 9.6
68910987 Antisense, RP_050203_01_G02, Mouse strain C57BL/6J (56 days, male) 9.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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