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NPAS2
AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		53.190
RNA expressioni
Consensus:17.9 nTPM
HPA:17.9 nTPM
GTEx:19.6 nTPM
FANTOM5:75.4 Scaled Tags Per Million
Pig:14.7 nTPM
Mouse:15.0 nTPM
Allen mouse:2.8 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA019674
Amygdala mean intensity 53.190
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 51.048
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 30.912
Cortical amygdala 47.250
Central amygdala 53.190
Medial amygdaloid nucleus 31.392

AMYGDALA - HPA Brain RNA-seq
Max nTPM 17.9
Sample id Sample description nTPM
Amygdala
nTPM: 10.0
2814 Male, age 76, right hemisphere 13.0
2517 Female, age 94, left hemisphere 12.5
1987 Female, age 91, left hemisphere 10.9
2695 Female, age 67, right hemisphere 8.7
2514 Male, age 75, right hemisphere 4.6
Basal amygdala
nTPM: 17.9
2243 Female, age 91, right hemisphere 24.9
2827 Female, age 67, right hemisphere 19.2
2685 Female, age 94, left hemisphere 17.2
2609 Male, age 75, right hemisphere 16.2
1955 Male, age 76, both hemispheres 15.2
2110 Male, age 80, left hemisphere 14.5
Central amygdala
nTPM: 13.9
2239 Male, age 80, left hemisphere 18.3
2515 Male, age 75, right hemisphere 16.7
1905 Male, age 76, both hemispheres 14.9
2701 Female, age 91, right hemisphere 10.3
2826 Female, age 94, left hemisphere 9.3
Corticomedial amygdala
nTPM: 14.3
2535 Female, age 67, right hemisphere 23.6
2829 Male, age 80, left hemisphere 17.4
2429 Female, age 94, left hemisphere 13.9
2428 Male, age 75, right hemisphere 13.7
2240 Male, age 76, both hemispheres 10.1
2242 Female, age 91, right hemisphere 6.9
Lateral amygdala
nTPM: 13.5
2830 Female, age 67, right hemisphere 16.1
2255 Female, age 91, right hemisphere 15.1
1883 Male, age 76, both hemispheres 14.3
2534 Female, age 94, left hemisphere 12.6
2256 Male, age 80, left hemisphere 12.3
2516 Male, age 75, right hemisphere 10.7
Stria terminalis, bed nucleus
nTPM: 12.1
2486 Female, age 94, both hemispheres 19.8
1974 Female, age 91, both hemispheres 9.5
2201 Male, age 74, unknown 7.0

AMYGDALA - GTEx RNA-seqi
Average nTPM 19.6
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 19.6
Samples: 152

Max nTPM: 35.2
Min nTPM: 8.9
Std nTPM: 5.9
Median nTPM: 18.8
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 35.2
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 33.8
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 33.0
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 32.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 32.2
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 31.8
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 31.4
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 30.3
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 29.9
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 29.8
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 29.6
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 75.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 75.4
FF:10151-102I7 76 years, female 75.4

AMYGDALA - Pig RNA-seqi
Average nTPM 14.7
Pig sample Sample description nTPM
Amygdala
nTPM: 14.7
Samples: 4

Max nTPM: 17.0
Min nTPM: 12.8
Sample A Female 17.0
Sample B Female 12.8
Sample C Male 14.6
Sample D Male 14.4

AMYGDALA - Mouse RNA-seqi
Average nTPM 15.0
Mouse sample Sample description nTPM
Amygdala
nTPM: 15.1
Samples: 4

Max nTPM: 19.0
Min nTPM: 12.3
Sample A Male 12.3
Sample B Male 15.4
Sample C Female 19.0
Sample D Female 13.5

AMYGDALA - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 2.8
70593327 Antisense, RP_050407_03_D11, Mouse strain C57BL/6J (56 days, male) 3.8
74724764 Antisense, RP_060220_04_B07, Mouse strain C57BL/6J (56 days, male) 1.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.