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PA2G4
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:48.6 nTPM
HPA:48.6 nTPM
GTEx:47.0 nTPM
FANTOM5:99.4 Scaled Tags Per Million
Mouse:57.9 nTPM
Allen mouse:7.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016484Antibody CAB011711Antibody CAB012428
Glial cells LowLowMedium
Neuronal cells HighHighMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.6
Sample id Sample description nTPM
Hippocampus
nTPM: 46.4
2621 Female, age 67, right hemisphere 48.4
1898 Male, age 80, left hemisphere 47.6
2529 Female, age 94, left hemisphere 46.9
1855 Male, age 76, left hemisphere 46.3
1911 Female, age 85, right hemisphere 45.0
2148 Female, age 91, left hemisphere 44.5
Dentate gyrus
nTPM: 45.6
2246 Female, age 85, both hemispheres 47.8
2010 Male, age 76, both hemispheres 46.8
1927 Female, age 91, both hemispheres 45.8
2530 Female, age 94, left hemisphere 45.8
2531 Female, age 67, both hemispheres 44.1
2528 Male, age 74, both hemispheres 43.2
Entorhinal gyrus
nTPM: 45.7
1787 Male, age 76, left hemisphere 47.3
1938 Female, age 85, left hemisphere 47.0
2117 Female, age 91, right hemisphere 45.9
2764 Male, age 80, right hemisphere 45.8
2686 Male, age 75, right hemisphere 44.9
2613 Female, age 94, left hemisphere 43.2
Hippocampus, CA1
nTPM: 47.1
2749 Male, age 80, left hemisphere 50.5
2045 Male, age 76, both hemispheres 48.3
1873 Female, age 85, both hemispheres 47.4
2527 Male, age 74, both hemispheres 45.8
2082 Female, age 91, right hemisphere 43.4
Hippocampus, CA2
nTPM: 46.1
1892 Male, age 76, both hemispheres 50.8
1963 Male, age 80, left hemisphere 46.1
1940 Female, age 85, left hemisphere 45.5
2249 Male, age 74, both hemispheres 45.0
2437 Female, age 94, left hemisphere 44.9
2113 Female, age 91, right hemisphere 44.1
Hippocampus, CA3
nTPM: 46.2
2137 Male, age 80, left hemisphere 48.3
1867 Male, age 76, both hemispheres 48.0
2620 Female, age 94, left hemisphere 47.2
1891 Female, age 85, both hemispheres 46.7
2861 Female, age 67, both hemispheres 43.6
2436 Male, age 74, both hemispheres 43.1
Parahippocampal cortex
nTPM: 46.5
1850 Male, age 80, both hemispheres 49.0
2532 Female, age 72, left hemisphere 48.4
2250 Female, age 67, right hemisphere 47.7
2245 Female, age 91, both hemispheres 47.6
1990 Female, age 91, right hemisphere 46.4
1933 Female, age 85, both hemispheres 46.2
2018 Male, age 76, both hemispheres 45.9
2693 Female, age 94, both hemispheres 45.1
2622 Female, age 67, right hemisphere 44.6
2692 Male, age 74, both hemispheres 44.3
Perirhinal gyrus
nTPM: 48.6
2848 Male, age 76, right hemisphere 50.4
1841 Female, age 85, right hemisphere 49.9
1847 Female, age 91, left hemisphere 48.6
1794 Male, age 80, right hemisphere 48.4
2521 Female, age 94, right hemisphere 45.6
Subiculum
nTPM: 46.2
1901 Male, age 80, both hemispheres 48.5
1977 Female, age 85, both hemispheres 47.5
2042 Male, age 76, both hemispheres 47.2
2619 Male, age 74, both hemispheres 45.8
2438 Female, age 94, left hemisphere 44.8
2729 Female, age 91, right hemisphere 43.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 47.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 47.0
Samples: 197

Max nTPM: 72.8
Min nTPM: 33.3
Std nTPM: 7.3
Median nTPM: 46.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 72.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 67.3
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 65.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 65.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 64.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 64.6
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 64.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 63.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 62.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 61.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 59.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 99.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 99.4
FF:10169-103B7 60 years, female 108.8
FF:10153-102I9 76 years, female 90.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 57.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.2
Samples: 4

Max nTPM: 59.1
Min nTPM: 53.2
Sample A Male 53.2
Sample B Male 56.5
Sample C Female 59.1
Sample D Female 56.0
Hippocampal formation
nTPM: 57.9
Samples: 4

Max nTPM: 60.0
Min nTPM: 54.9
Sample A Male 60.0
Sample B Male 54.9
Sample C Female 58.1
Sample D Female 58.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.0
69262297 Antisense, RP_050303_01_G02, Mouse strain C57BL/6J (56 days, male) 7.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.