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IRF2BP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:12.7 nTPM
HPA:12.7 nTPM
GTEx:16.5 nTPM
FANTOM5:17.3 Scaled Tags Per Million
Pig:17.3 nTPM
Mouse:15.0 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042164
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.7
Sample id Sample description nTPM
Hippocampus
nTPM: 9.6
2529 Female, age 94, left hemisphere 11.1
1898 Male, age 80, left hemisphere 10.7
2621 Female, age 67, right hemisphere 10.0
1911 Female, age 85, right hemisphere 9.2
2148 Female, age 91, left hemisphere 9.0
1855 Male, age 76, left hemisphere 7.7
Dentate gyrus
nTPM: 10.3
2530 Female, age 94, left hemisphere 11.7
2531 Female, age 67, both hemispheres 11.3
1927 Female, age 91, both hemispheres 10.4
2528 Male, age 74, both hemispheres 10.3
2246 Female, age 85, both hemispheres 9.4
2010 Male, age 76, both hemispheres 8.6
Entorhinal gyrus
nTPM: 12.7
2764 Male, age 80, right hemisphere 15.3
2613 Female, age 94, left hemisphere 14.2
1787 Male, age 76, left hemisphere 12.7
2117 Female, age 91, right hemisphere 12.6
1938 Female, age 85, left hemisphere 12.0
2686 Male, age 75, right hemisphere 9.7
Hippocampus, CA1
nTPM: 9.6
2749 Male, age 80, left hemisphere 13.6
2527 Male, age 74, both hemispheres 10.1
2082 Female, age 91, right hemisphere 8.9
1873 Female, age 85, both hemispheres 7.7
2045 Male, age 76, both hemispheres 7.5
Hippocampus, CA2
nTPM: 10.1
2437 Female, age 94, left hemisphere 11.2
1963 Male, age 80, left hemisphere 10.8
2249 Male, age 74, both hemispheres 10.5
1940 Female, age 85, left hemisphere 9.9
2113 Female, age 91, right hemisphere 9.4
1892 Male, age 76, both hemispheres 8.9
Hippocampus, CA3
nTPM: 10.8
2620 Female, age 94, left hemisphere 15.7
2861 Female, age 67, both hemispheres 11.8
2137 Male, age 80, left hemisphere 11.7
2436 Male, age 74, both hemispheres 8.7
1891 Female, age 85, both hemispheres 8.4
1867 Male, age 76, both hemispheres 8.2
Parahippocampal cortex
nTPM: 10.8
1990 Female, age 91, right hemisphere 13.5
2245 Female, age 91, both hemispheres 13.0
2532 Female, age 72, left hemisphere 12.2
1933 Female, age 85, both hemispheres 11.0
2250 Female, age 67, right hemisphere 10.8
1850 Male, age 80, both hemispheres 9.8
2622 Female, age 67, right hemisphere 9.7
2693 Female, age 94, both hemispheres 9.5
2692 Male, age 74, both hemispheres 9.3
2018 Male, age 76, both hemispheres 9.2
Perirhinal gyrus
nTPM: 12.0
1794 Male, age 80, right hemisphere 14.6
2521 Female, age 94, right hemisphere 11.9
1841 Female, age 85, right hemisphere 11.7
1847 Female, age 91, left hemisphere 11.4
2848 Male, age 76, right hemisphere 10.5
Subiculum
nTPM: 10.0
1977 Female, age 85, both hemispheres 12.9
1901 Male, age 80, both hemispheres 10.5
2438 Female, age 94, left hemisphere 9.6
2619 Male, age 74, both hemispheres 9.6
2042 Male, age 76, both hemispheres 9.2
2729 Female, age 91, right hemisphere 8.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.5
Samples: 197

Max nTPM: 36.1
Min nTPM: 6.7
Std nTPM: 3.8
Median nTPM: 16.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 36.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 28.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 26.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 26.6
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 22.9
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 22.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 22.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 22.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 22.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 22.5
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 22.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.3
FF:10153-102I9 76 years, female 21.0
FF:10169-103B7 60 years, female 13.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.4
Samples: 4

Max nTPM: 21.3
Min nTPM: 14.4
Sample A Female 21.3
Sample B Female 17.9
Sample C Male 15.8
Sample D Male 14.4
Entorhinal cortex
nTPM: 15.4
Samples: 4

Max nTPM: 16.9
Min nTPM: 13.2
Sample A Female 16.6
Sample B Female 14.9
Sample C Male 16.9
Sample D Male 13.2
Subiculum
nTPM: 15.1
Samples: 4

Max nTPM: 19.7
Min nTPM: 12.2
Sample A Female 19.7
Sample B Female 13.1
Sample C Male 15.4
Sample D Male 12.2
Ventral hippocampus
nTPM: 17.1
Samples: 4

Max nTPM: 21.5
Min nTPM: 11.4
Sample A Female 16.2
Sample B Female 11.4
Sample C Male 21.5
Sample D Male 19.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.9
Samples: 4

Max nTPM: 16.1
Min nTPM: 13.7
Sample A Male 16.1
Sample B Male 15.4
Sample C Female 13.7
Sample D Female 14.2
Hippocampal formation
nTPM: 15.0
Samples: 4

Max nTPM: 17.1
Min nTPM: 12.9
Sample A Male 12.9
Sample B Male 14.6
Sample C Female 17.1
Sample D Female 15.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
70431403 Antisense, RP_050614_02_G06, Mouse strain C57BL/6J (56 days, male) 3.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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