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KBTBD2
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:25.8 nTPM
HPA:25.8 nTPM
GTEx:20.2 nTPM
FANTOM5:22.3 Scaled Tags Per Million
Pig:14.2 nTPM
Mouse:38.6 nTPM
Allen mouse:0.0 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 25.8
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 23.9
2411 Female, age 72, unknown 27.7
1870 Female, age 42, unknown 25.3
2019 Male, age 18, unknown 25.3
1830 Male, age 51, unknown 24.4
1833 Male, age 53, unknown 23.9
1827 Male, age 72, unknown 23.6
2586 Male, age 75, left hemisphere 23.1
2666 Male, age 74, left hemisphere 22.3
2828 Female, age 72, unknown 22.2
2219 Male, age 76, both hemispheres 21.7
Dorsal raphe nucleus
nTPM: 23.4
1828 Male, age 53, unknown 24.6
2750 Male, age 76, both hemispheres 24.0
2047 Male, age 72, unknown 23.4
2016 Female, age 72, unknown 23.0
2298 Female, age 72, unknown 22.0
Inferior colliculus
nTPM: 25.5
1848 Female, age 42, unknown 26.2
2097 Female, age 72, unknown 26.2
1890 Male, age 53, unknown 25.4
2849 Male, age 72, unknown 24.2
Median raphe nucleus
nTPM: 22.9
2220 Male, age 76, midline 22.9
Pedunculopontine tegmental nucleus
nTPM: 24.6
2334 Male, age 80, both hemispheres 25.4
1921 Female, age 85, both hemispheres 25.0
2338 Male, age 61, both hemispheres 23.2
Periaquaductal grey, anterior
nTPM: 23.2
2502 Female, age 75, unknown 24.2
1947 Male, age 18, unknown 24.0
1795 Male, age 51, unknown 21.2
Periaquaductal grey, dorsal
nTPM: 22.3
2464 Female, age 72, unknown 23.7
1840 Male, age 53, unknown 22.4
1831 Male, age 72, unknown 21.7
2850 Male, age 76, both hemispheres 21.3
Periaquaductal grey, lateral
nTPM: 20.6
2053 Male, age 18, unknown 21.6
2140 Male, age 76, both hemispheres 20.6
2272 Male, age 74, both hemispheres 19.6
Pretectal area
nTPM: 22.9
2007 Male, age 72, unknown 25.5
1817 Female, age 42, unknown 25.2
2667 Female, age 75, unknown 23.7
1944 Female, age 72, unknown 22.8
1816 Male, age 51, unknown 22.6
2316 Male, age 76, right hemisphere 22.6
1815 Male, age 53, unknown 22.5
2825 Male, age 18, unknown 22.0
2273 Male, age 74, both hemispheres 21.7
2407 Male, age 75, both hemispheres 21.7
2224 Female, age 72, unknown 21.3
Red nucleus
nTPM: 25.8
1821 Female, age 72, unknown 30.2
1904 Male, age 53, unknown 27.0
2503 Female, age 72, unknown 26.9
2588 Male, age 74, left hemisphere 26.7
1954 Female, age 42, unknown 26.6
1865 Male, age 51, unknown 26.4
2769 Male, age 72, unknown 25.7
2227 Male, age 72, unknown 25.6
2785 Male, age 18, unknown 25.3
2725 Female, age 75, unknown 23.3
2823 Male, age 76, right hemisphere 23.3
2584 Male, age 75, left hemisphere 22.1
Substantia nigra
nTPM: 24.8
2241 Male, age 72, unknown 27.4
2409 Female, age 72, unknown 26.1
1916 Female, age 42, unknown 25.4
1889 Female, age 72, unknown 25.2
1851 Male, age 51, unknown 24.9
1941 Male, age 53, unknown 24.7
2590 Female, age 75, unknown 24.2
2583 Male, age 75, right hemisphere 23.9
2665 Male, age 74, both hemispheres 23.6
2699 Male, age 18, unknown 22.6
Superior colliculus
nTPM: 22.9
1895 Male, age 76, right hemisphere 25.8
2587 Male, age 74, left hemisphere 25.0
1839 Male, age 51, unknown 24.6
2668 Female, age 75, unknown 23.6
2261 Male, age 18, unknown 22.8
2087 Female, age 72, unknown 22.7
1913 Female, age 42, unknown 22.0
1796 Male, age 53, unknown 21.7
2664 Male, age 75, both hemispheres 20.7
1995 Male, age 72, unknown 20.3
Ventral tegmental area
nTPM: 23.7
2410 Female, age 72, unknown 24.6
2223 Female, age 72, unknown 24.4
2218 Male, age 76, both hemispheres 23.8
1915 Female, age 42, unknown 23.5
1942 Male, age 51, unknown 22.8
2021 Male, age 53, unknown 22.8

MIDBRAIN - GTEx RNA-seqi
Average nTPM 20.2
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 20.2
Samples: 139

Max nTPM: 33.4
Min nTPM: 14.5
Std nTPM: 3.3
Median nTPM: 19.7
GTEX-UTHO-0011-R2A-SM-3GIKC 60-69 years, male 33.4
GTEX-ZDXO-0011-R2b-SM-4WKFG 60-69 years, male 31.3
GTEX-1H23P-0011-R2a-SM-CKZP3 60-69 years, male 28.8
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 28.4
GTEX-1J1OQ-0011-R2b-SM-ARU88 40-49 years, female 27.6
GTEX-11TUW-0011-R2b-SM-DO92T 60-69 years, male 26.3
GTEX-QDT8-0011-R2A-SM-32PKQ 30-39 years, female 26.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO 40-49 years, male 26.0
GTEX-13PDP-0011-R2b-SM-5O9DH 60-69 years, male 25.7
GTEX-11DZ1-0011-R2a-SM-DNZZM 50-59 years, male 25.4
GTEX-1IL2U-0011-R2a-SM-ARU6V 60-69 years, male 25.4
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 22.3
FF:10158-103A5 76 years, female 22.3

MIDBRAIN - Pig RNA-seqi
Average nTPM 14.2
Pig sample Sample description nTPM
Midbrain
nTPM: 13.9
Samples: 4

Max nTPM: 14.8
Min nTPM: 13.1
Sample A Female 13.1
Sample B Female 14.2
Sample C Male 14.8
Sample D Male 13.3
Periaqueductal gray
nTPM: 12.3
Samples: 3

Max nTPM: 13.2
Min nTPM: 11.0
Sample B Female 13.2
Sample C Male 12.6
Sample D Male 11.0
Substantia nigra
nTPM: 13.1
Samples: 4

Max nTPM: 17.5
Min nTPM: 9.9
Sample A Female 17.5
Sample B Female 12.3
Sample C Male 12.6
Sample D Male 9.9
Superior colliculi
nTPM: 14.2
Samples: 4

Max nTPM: 16.1
Min nTPM: 12.4
Sample A Female 15.2
Sample B Female 12.4
Sample C Male 16.1
Sample D Male 13.1

MIDBRAIN - Mouse RNA-seqi
Average nTPM 38.6
Mouse sample Sample description nTPM
Midbrain
nTPM: 38.6
Samples: 4

Max nTPM: 42.6
Min nTPM: 36.3
Sample A Male 36.3
Sample B Male 42.6
Sample C Female 38.2
Sample D Female 37.4

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.0
68196939 Antisense, RP_041116_01_G10, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
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