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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:21.3 nTPM
HPA:21.3 nTPM
GTEx:364.3 nTPM
FANTOM5:257.9 Scaled Tags Per Million
Mouse:260.8 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046976
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.3
Sample id Sample description nTPM
Hippocampus
nTPM: 19.2
1855 Male, age 76, left hemisphere 21.0
2148 Female, age 91, left hemisphere 21.0
2529 Female, age 94, left hemisphere 20.0
1911 Female, age 85, right hemisphere 19.5
2621 Female, age 67, right hemisphere 18.6
1898 Male, age 80, left hemisphere 15.1
Dentate gyrus
nTPM: 18.3
2531 Female, age 67, both hemispheres 22.9
2528 Male, age 74, both hemispheres 21.5
1927 Female, age 91, both hemispheres 19.2
2530 Female, age 94, left hemisphere 16.3
2246 Female, age 85, both hemispheres 15.4
2010 Male, age 76, both hemispheres 14.5
Entorhinal gyrus
nTPM: 18.3
1938 Female, age 85, left hemisphere 21.0
2686 Male, age 75, right hemisphere 20.0
2117 Female, age 91, right hemisphere 19.4
2613 Female, age 94, left hemisphere 17.8
2764 Male, age 80, right hemisphere 16.5
1787 Male, age 76, left hemisphere 15.1
Hippocampus, CA1
nTPM: 20.6
2082 Female, age 91, right hemisphere 22.7
1873 Female, age 85, both hemispheres 21.4
2045 Male, age 76, both hemispheres 21.3
2527 Male, age 74, both hemispheres 19.4
2749 Male, age 80, left hemisphere 18.0
Hippocampus, CA2
nTPM: 18.8
1940 Female, age 85, left hemisphere 24.0
2113 Female, age 91, right hemisphere 23.3
2249 Male, age 74, both hemispheres 20.1
2437 Female, age 94, left hemisphere 15.9
1892 Male, age 76, both hemispheres 15.3
1963 Male, age 80, left hemisphere 14.2
Hippocampus, CA3
nTPM: 21.3
2620 Female, age 94, left hemisphere 30.0
2861 Female, age 67, both hemispheres 25.6
1891 Female, age 85, both hemispheres 21.0
2436 Male, age 74, both hemispheres 20.0
1867 Male, age 76, both hemispheres 16.9
2137 Male, age 80, left hemisphere 14.3
Parahippocampal cortex
nTPM: 19.0
2622 Female, age 67, right hemisphere 22.7
2692 Male, age 74, both hemispheres 22.5
1933 Female, age 85, both hemispheres 19.5
1850 Male, age 80, both hemispheres 19.3
2693 Female, age 94, both hemispheres 19.0
2532 Female, age 72, left hemisphere 18.9
2250 Female, age 67, right hemisphere 18.8
1990 Female, age 91, right hemisphere 17.9
2018 Male, age 76, both hemispheres 16.2
2245 Female, age 91, both hemispheres 15.4
Perirhinal gyrus
nTPM: 16.0
2521 Female, age 94, right hemisphere 19.0
1841 Female, age 85, right hemisphere 17.2
2848 Male, age 76, right hemisphere 16.7
1794 Male, age 80, right hemisphere 14.8
1847 Female, age 91, left hemisphere 12.5
Subiculum
nTPM: 19.5
2619 Male, age 74, both hemispheres 23.3
2729 Female, age 91, right hemisphere 22.6
2438 Female, age 94, left hemisphere 21.8
1977 Female, age 85, both hemispheres 21.0
2042 Male, age 76, both hemispheres 15.2
1901 Male, age 80, both hemispheres 12.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 364.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 364.3
Samples: 197

Max nTPM: 1271.5
Min nTPM: 113.1
Std nTPM: 154.6
Median nTPM: 326.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1271.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 864.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 799.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 765.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 738.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 719.1
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 711.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 709.4
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 686.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 670.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 663.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 257.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 257.9
FF:10169-103B7 60 years, female 357.8
FF:10153-102I9 76 years, female 158.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 260.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 235.8
Samples: 4

Max nTPM: 265.1
Min nTPM: 216.4
Sample A Male 216.4
Sample B Male 223.0
Sample C Female 265.1
Sample D Female 238.7
Hippocampal formation
nTPM: 260.8
Samples: 4

Max nTPM: 300.4
Min nTPM: 246.4
Sample A Male 300.4
Sample B Male 246.4
Sample C Female 248.6
Sample D Female 247.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
73716566 Antisense, RP_051206_03_C11, Mouse strain C57BL/6J (56 days, male) 1.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.