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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:14.6 nTPM
HPA:14.6 nTPM
GTEx:12.5 nTPM
FANTOM5:32.0 Scaled Tags Per Million

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005553
Glial cells Not detected
Neuronal cells Low


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.6
Sample id Sample description nTPM
Hippocampus
nTPM: 13.2
1911 Female, age 85, right hemisphere 15.7
2148 Female, age 91, left hemisphere 13.9
1855 Male, age 76, left hemisphere 13.4
2621 Female, age 67, right hemisphere 12.5
2529 Female, age 94, left hemisphere 12.3
1898 Male, age 80, left hemisphere 11.6
Dentate gyrus
nTPM: 13.7
2528 Male, age 74, both hemispheres 16.0
2246 Female, age 85, both hemispheres 14.3
2530 Female, age 94, left hemisphere 13.8
2531 Female, age 67, both hemispheres 13.4
2010 Male, age 76, both hemispheres 12.4
1927 Female, age 91, both hemispheres 12.2
Entorhinal gyrus
nTPM: 14.5
2613 Female, age 94, left hemisphere 19.3
2686 Male, age 75, right hemisphere 15.6
1938 Female, age 85, left hemisphere 13.3
1787 Male, age 76, left hemisphere 13.1
2117 Female, age 91, right hemisphere 12.8
2764 Male, age 80, right hemisphere 12.8
Hippocampus, CA1
nTPM: 14.1
1873 Female, age 85, both hemispheres 16.2
2527 Male, age 74, both hemispheres 14.8
2082 Female, age 91, right hemisphere 14.2
2045 Male, age 76, both hemispheres 13.6
2749 Male, age 80, left hemisphere 11.9
Hippocampus, CA2
nTPM: 13.1
2437 Female, age 94, left hemisphere 15.2
1892 Male, age 76, both hemispheres 14.9
1963 Male, age 80, left hemisphere 13.3
2113 Female, age 91, right hemisphere 12.6
2249 Male, age 74, both hemispheres 11.8
1940 Female, age 85, left hemisphere 10.8
Hippocampus, CA3
nTPM: 12.4
2620 Female, age 94, left hemisphere 14.6
1891 Female, age 85, both hemispheres 13.2
1867 Male, age 76, both hemispheres 13.0
2436 Male, age 74, both hemispheres 12.9
2137 Male, age 80, left hemisphere 10.9
2861 Female, age 67, both hemispheres 9.7
Parahippocampal cortex
nTPM: 13.3
2692 Male, age 74, both hemispheres 18.7
1850 Male, age 80, both hemispheres 14.3
1933 Female, age 85, both hemispheres 14.0
2693 Female, age 94, both hemispheres 13.7
2622 Female, age 67, right hemisphere 13.5
1990 Female, age 91, right hemisphere 12.1
2018 Male, age 76, both hemispheres 12.1
2245 Female, age 91, both hemispheres 11.9
2532 Female, age 72, left hemisphere 11.9
2250 Female, age 67, right hemisphere 10.9
Perirhinal gyrus
nTPM: 13.4
2848 Male, age 76, right hemisphere 16.8
1794 Male, age 80, right hemisphere 13.2
1841 Female, age 85, right hemisphere 12.9
1847 Female, age 91, left hemisphere 12.3
2521 Female, age 94, right hemisphere 11.9
Subiculum
nTPM: 14.6
2619 Male, age 74, both hemispheres 16.8
2042 Male, age 76, both hemispheres 15.9
2438 Female, age 94, left hemisphere 14.2
1977 Female, age 85, both hemispheres 13.9
1901 Male, age 80, both hemispheres 13.4
2729 Female, age 91, right hemisphere 13.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.5
Samples: 197

Max nTPM: 23.1
Min nTPM: 4.7
Std nTPM: 2.8
Median nTPM: 12.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 23.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 22.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 20.0
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 19.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 18.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 18.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 17.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 17.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 17.6
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 17.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 17.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.0
FF:10169-103B7 60 years, female 33.4
FF:10153-102I9 76 years, female 30.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.