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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:9.9 nTPM
HPA:9.9 nTPM
GTEx:10.4 nTPM
FANTOM5:8.5 Scaled Tags Per Million
Pig:3.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA074249
Glial cells Not detected
Neuronal cells Not detected

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.9
Sample id Sample description nTPM
Hippocampus
nTPM: 5.8
2529 Female, age 94, left hemisphere 7.3
2148 Female, age 91, left hemisphere 6.6
1855 Male, age 76, left hemisphere 6.5
1911 Female, age 85, right hemisphere 5.5
2621 Female, age 67, right hemisphere 5.1
1898 Male, age 80, left hemisphere 3.8
Dentate gyrus
nTPM: 7.3
2531 Female, age 67, both hemispheres 11.8
2246 Female, age 85, both hemispheres 7.7
2530 Female, age 94, left hemisphere 7.6
2010 Male, age 76, both hemispheres 6.0
2528 Male, age 74, both hemispheres 5.4
1927 Female, age 91, both hemispheres 5.1
Entorhinal gyrus
nTPM: 9.9
2764 Male, age 80, right hemisphere 13.7
2686 Male, age 75, right hemisphere 11.5
2613 Female, age 94, left hemisphere 9.9
1787 Male, age 76, left hemisphere 9.7
2117 Female, age 91, right hemisphere 9.4
1938 Female, age 85, left hemisphere 5.4
Hippocampus, CA1
nTPM: 6.3
2045 Male, age 76, both hemispheres 11.1
2082 Female, age 91, right hemisphere 10.0
2527 Male, age 74, both hemispheres 4.4
1873 Female, age 85, both hemispheres 3.8
2749 Male, age 80, left hemisphere 2.2
Hippocampus, CA2
nTPM: 6.4
2113 Female, age 91, right hemisphere 8.5
2437 Female, age 94, left hemisphere 8.4
1940 Female, age 85, left hemisphere 7.4
1892 Male, age 76, both hemispheres 6.3
1963 Male, age 80, left hemisphere 4.7
2249 Male, age 74, both hemispheres 2.9
Hippocampus, CA3
nTPM: 6.0
2861 Female, age 67, both hemispheres 8.9
1867 Male, age 76, both hemispheres 7.9
2620 Female, age 94, left hemisphere 7.8
1891 Female, age 85, both hemispheres 4.7
2137 Male, age 80, left hemisphere 4.3
2436 Male, age 74, both hemispheres 2.4
Parahippocampal cortex
nTPM: 8.4
2622 Female, age 67, right hemisphere 12.8
2018 Male, age 76, both hemispheres 10.9
2532 Female, age 72, left hemisphere 10.0
2245 Female, age 91, both hemispheres 9.2
2693 Female, age 94, both hemispheres 8.5
1990 Female, age 91, right hemisphere 7.9
1933 Female, age 85, both hemispheres 6.9
1850 Male, age 80, both hemispheres 6.4
2692 Male, age 74, both hemispheres 5.8
2250 Female, age 67, right hemisphere 5.7
Perirhinal gyrus
nTPM: 8.5
2848 Male, age 76, right hemisphere 12.4
1794 Male, age 80, right hemisphere 10.4
1841 Female, age 85, right hemisphere 7.2
1847 Female, age 91, left hemisphere 6.2
2521 Female, age 94, right hemisphere 6.1
Subiculum
nTPM: 6.5
2729 Female, age 91, right hemisphere 8.7
2619 Male, age 74, both hemispheres 6.7
1977 Female, age 85, both hemispheres 6.6
1901 Male, age 80, both hemispheres 6.2
2438 Female, age 94, left hemisphere 5.4
2042 Male, age 76, both hemispheres 5.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.4
Samples: 197

Max nTPM: 20.7
Min nTPM: 3.4
Std nTPM: 2.7
Median nTPM: 10.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 20.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 18.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 18.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 18.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 17.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 17.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 16.8
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 16.7
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 16.4
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 16.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 16.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.5
FF:10153-102I9 76 years, female 10.7
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 3.5
Samples: 4

Max nTPM: 4.1
Min nTPM: 2.9
Sample A Female 4.1
Sample B Female 3.5
Sample C Male 3.6
Sample D Male 2.9
Entorhinal cortex
nTPM: 3.8
Samples: 4

Max nTPM: 4.1
Min nTPM: 3.3
Sample A Female 3.8
Sample B Female 3.9
Sample C Male 4.1
Sample D Male 3.3
Subiculum
nTPM: 3.4
Samples: 4

Max nTPM: 3.9
Min nTPM: 3.1
Sample A Female 3.9
Sample B Female 3.3
Sample C Male 3.4
Sample D Male 3.1
Ventral hippocampus
nTPM: 3.7
Samples: 4

Max nTPM: 4.3
Min nTPM: 3.2
Sample A Female 3.8
Sample B Female 3.3
Sample C Male 4.3
Sample D Male 3.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.