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JAGN1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:21.6 nTPM
HPA:21.6 nTPM
GTEx:14.1 nTPM
FANTOM5:17.0 Scaled Tags Per Million
Mouse:51.9 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.6
Sample id Sample description nTPM
Hippocampus
nTPM: 21.1
1898 Male, age 80, left hemisphere 21.9
1855 Male, age 76, left hemisphere 21.2
2148 Female, age 91, left hemisphere 21.1
2621 Female, age 67, right hemisphere 21.1
1911 Female, age 85, right hemisphere 20.7
2529 Female, age 94, left hemisphere 20.6
Dentate gyrus
nTPM: 20.9
1927 Female, age 91, both hemispheres 21.7
2528 Male, age 74, both hemispheres 21.7
2010 Male, age 76, both hemispheres 21.5
2530 Female, age 94, left hemisphere 20.9
2246 Female, age 85, both hemispheres 20.3
2531 Female, age 67, both hemispheres 19.4
Entorhinal gyrus
nTPM: 20.4
2117 Female, age 91, right hemisphere 21.3
2764 Male, age 80, right hemisphere 20.7
1787 Male, age 76, left hemisphere 20.5
1938 Female, age 85, left hemisphere 20.3
2613 Female, age 94, left hemisphere 19.8
2686 Male, age 75, right hemisphere 19.7
Hippocampus, CA1
nTPM: 21.6
2749 Male, age 80, left hemisphere 23.2
2527 Male, age 74, both hemispheres 21.8
1873 Female, age 85, both hemispheres 21.4
2045 Male, age 76, both hemispheres 20.7
2082 Female, age 91, right hemisphere 20.7
Hippocampus, CA2
nTPM: 21.6
1963 Male, age 80, left hemisphere 23.4
2249 Male, age 74, both hemispheres 22.6
1892 Male, age 76, both hemispheres 21.8
2113 Female, age 91, right hemisphere 20.7
1940 Female, age 85, left hemisphere 20.6
2437 Female, age 94, left hemisphere 20.5
Hippocampus, CA3
nTPM: 21.4
1867 Male, age 76, both hemispheres 22.0
2436 Male, age 74, both hemispheres 21.7
2620 Female, age 94, left hemisphere 21.7
2137 Male, age 80, left hemisphere 21.6
1891 Female, age 85, both hemispheres 21.5
2861 Female, age 67, both hemispheres 19.8
Parahippocampal cortex
nTPM: 20.5
1850 Male, age 80, both hemispheres 21.3
1990 Female, age 91, right hemisphere 21.1
2018 Male, age 76, both hemispheres 21.1
2250 Female, age 67, right hemisphere 21.0
1933 Female, age 85, both hemispheres 20.7
2532 Female, age 72, left hemisphere 20.2
2245 Female, age 91, both hemispheres 20.1
2692 Male, age 74, both hemispheres 20.1
2693 Female, age 94, both hemispheres 20.1
2622 Female, age 67, right hemisphere 18.9
Perirhinal gyrus
nTPM: 21.0
1847 Female, age 91, left hemisphere 21.6
1841 Female, age 85, right hemisphere 21.5
1794 Male, age 80, right hemisphere 21.4
2521 Female, age 94, right hemisphere 20.7
2848 Male, age 76, right hemisphere 19.7
Subiculum
nTPM: 20.8
1901 Male, age 80, both hemispheres 21.7
1977 Female, age 85, both hemispheres 21.2
2042 Male, age 76, both hemispheres 21.2
2619 Male, age 74, both hemispheres 20.4
2729 Female, age 91, right hemisphere 20.3
2438 Female, age 94, left hemisphere 19.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.1
Samples: 197

Max nTPM: 24.0
Min nTPM: 8.0
Std nTPM: 2.5
Median nTPM: 14.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 24.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 21.2
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 20.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 20.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 20.3
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 19.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 18.8
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 18.7
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 18.5
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 18.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 18.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.0
FF:10153-102I9 76 years, female 17.4
FF:10169-103B7 60 years, female 16.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 51.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.9
Samples: 4

Max nTPM: 46.9
Min nTPM: 38.8
Sample A Male 38.8
Sample B Male 41.6
Sample C Female 46.9
Sample D Female 40.3
Hippocampal formation
nTPM: 51.9
Samples: 4

Max nTPM: 53.7
Min nTPM: 49.5
Sample A Male 53.7
Sample B Male 49.5
Sample C Female 51.9
Sample D Female 52.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
68162259 Antisense, RP_041122_02_F04, Mouse strain C57BL/6J (56 days, male) 2.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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