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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:51.0 nTPM
HPA:51.0 nTPM
GTEx:53.1 nTPM
FANTOM5:56.4 Scaled Tags Per Million
Pig:25.7 nTPM
Mouse:22.8 nTPM
Allen mouse:6.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042250
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.0
Sample id Sample description nTPM
Hippocampus
nTPM: 50.8
1898 Male, age 80, left hemisphere 52.0
2621 Female, age 67, right hemisphere 51.5
2148 Female, age 91, left hemisphere 51.1
1855 Male, age 76, left hemisphere 50.7
2529 Female, age 94, left hemisphere 50.3
1911 Female, age 85, right hemisphere 49.1
Dentate gyrus
nTPM: 50.0
2530 Female, age 94, left hemisphere 54.8
1927 Female, age 91, both hemispheres 51.9
2010 Male, age 76, both hemispheres 51.9
2528 Male, age 74, both hemispheres 48.4
2246 Female, age 85, both hemispheres 47.7
2531 Female, age 67, both hemispheres 45.1
Entorhinal gyrus
nTPM: 49.1
2613 Female, age 94, left hemisphere 50.2
2117 Female, age 91, right hemisphere 49.7
1787 Male, age 76, left hemisphere 49.6
1938 Female, age 85, left hemisphere 48.9
2764 Male, age 80, right hemisphere 48.7
2686 Male, age 75, right hemisphere 47.8
Hippocampus, CA1
nTPM: 51.0
2749 Male, age 80, left hemisphere 61.9
1873 Female, age 85, both hemispheres 52.7
2527 Male, age 74, both hemispheres 51.0
2082 Female, age 91, right hemisphere 45.5
2045 Male, age 76, both hemispheres 44.0
Hippocampus, CA2
nTPM: 50.9
1963 Male, age 80, left hemisphere 60.9
1892 Male, age 76, both hemispheres 55.8
2437 Female, age 94, left hemisphere 49.4
2249 Male, age 74, both hemispheres 47.1
2113 Female, age 91, right hemisphere 46.9
1940 Female, age 85, left hemisphere 45.2
Hippocampus, CA3
nTPM: 49.0
2137 Male, age 80, left hemisphere 56.0
1867 Male, age 76, both hemispheres 51.2
2861 Female, age 67, both hemispheres 51.1
2436 Male, age 74, both hemispheres 46.1
1891 Female, age 85, both hemispheres 45.6
2620 Female, age 94, left hemisphere 44.2
Parahippocampal cortex
nTPM: 47.5
2692 Male, age 74, both hemispheres 49.1
2245 Female, age 91, both hemispheres 48.8
2250 Female, age 67, right hemisphere 48.7
2532 Female, age 72, left hemisphere 48.2
2622 Female, age 67, right hemisphere 48.2
1933 Female, age 85, both hemispheres 48.1
1990 Female, age 91, right hemisphere 47.3
1850 Male, age 80, both hemispheres 47.2
2018 Male, age 76, both hemispheres 45.0
2693 Female, age 94, both hemispheres 44.5
Perirhinal gyrus
nTPM: 47.0
1847 Female, age 91, left hemisphere 49.7
1794 Male, age 80, right hemisphere 47.9
1841 Female, age 85, right hemisphere 47.1
2521 Female, age 94, right hemisphere 46.6
2848 Male, age 76, right hemisphere 43.7
Subiculum
nTPM: 47.9
2619 Male, age 74, both hemispheres 49.8
1901 Male, age 80, both hemispheres 48.9
1977 Female, age 85, both hemispheres 48.9
2042 Male, age 76, both hemispheres 47.2
2438 Female, age 94, left hemisphere 46.3
2729 Female, age 91, right hemisphere 46.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 53.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.1
Samples: 197

Max nTPM: 124.7
Min nTPM: 28.2
Std nTPM: 14.0
Median nTPM: 52.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 124.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 106.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 91.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 90.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 83.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 82.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 80.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 78.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 76.0
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 75.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 75.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.4
FF:10153-102I9 76 years, female 65.8
FF:10169-103B7 60 years, female 47.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.7
Samples: 4

Max nTPM: 31.7
Min nTPM: 22.1
Sample A Female 31.7
Sample B Female 25.2
Sample C Male 23.8
Sample D Male 22.1
Entorhinal cortex
nTPM: 22.0
Samples: 4

Max nTPM: 24.1
Min nTPM: 20.5
Sample A Female 24.1
Sample B Female 21.1
Sample C Male 22.2
Sample D Male 20.5
Subiculum
nTPM: 22.3
Samples: 4

Max nTPM: 28.8
Min nTPM: 19.1
Sample A Female 28.8
Sample B Female 19.8
Sample C Male 21.3
Sample D Male 19.1
Ventral hippocampus
nTPM: 24.4
Samples: 4

Max nTPM: 28.2
Min nTPM: 18.1
Sample A Female 24.9
Sample B Female 18.1
Sample C Male 26.5
Sample D Male 28.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.6
Samples: 4

Max nTPM: 22.2
Min nTPM: 18.9
Sample A Male 22.2
Sample B Male 18.9
Sample C Female 21.1
Sample D Female 20.1
Hippocampal formation
nTPM: 22.8
Samples: 4

Max nTPM: 23.4
Min nTPM: 22.4
Sample A Male 23.4
Sample B Male 22.5
Sample C Female 22.8
Sample D Female 22.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.4
71724466 Antisense, RP_050927_03_F03, Mouse strain C57BL/6J (56 days, male) 6.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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