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C9orf16
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:314.3 nTPM
HPA:314.3 nTPM
GTEx:624.3 nTPM
FANTOM5:343.6 Scaled Tags Per Million
Mouse:234.2 nTPM
Allen mouse:9.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020725
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 314.3
Sample id Sample description nTPM
Hippocampus
nTPM: 275.6
1855 Male, age 76, left hemisphere 377.9
1898 Male, age 80, left hemisphere 336.9
2621 Female, age 67, right hemisphere 292.8
2148 Female, age 91, left hemisphere 230.8
1911 Female, age 85, right hemisphere 218.3
2529 Female, age 94, left hemisphere 196.8
Dentate gyrus
nTPM: 262.1
1927 Female, age 91, both hemispheres 351.1
2530 Female, age 94, left hemisphere 339.5
2010 Male, age 76, both hemispheres 334.6
2246 Female, age 85, both hemispheres 202.8
2531 Female, age 67, both hemispheres 181.0
2528 Male, age 74, both hemispheres 163.8
Entorhinal gyrus
nTPM: 154.7
2613 Female, age 94, left hemisphere 184.5
2764 Male, age 80, right hemisphere 156.1
1938 Female, age 85, left hemisphere 155.9
1787 Male, age 76, left hemisphere 153.1
2686 Male, age 75, right hemisphere 149.5
2117 Female, age 91, right hemisphere 129.0
Hippocampus, CA1
nTPM: 314.3
2749 Male, age 80, left hemisphere 603.6
2045 Male, age 76, both hemispheres 306.8
1873 Female, age 85, both hemispheres 299.5
2527 Male, age 74, both hemispheres 203.5
2082 Female, age 91, right hemisphere 157.9
Hippocampus, CA2
nTPM: 259.1
1963 Male, age 80, left hemisphere 412.6
1892 Male, age 76, both hemispheres 371.9
2437 Female, age 94, left hemisphere 251.0
2249 Male, age 74, both hemispheres 184.6
1940 Female, age 85, left hemisphere 171.5
2113 Female, age 91, right hemisphere 162.9
Hippocampus, CA3
nTPM: 263.8
2137 Male, age 80, left hemisphere 443.4
1867 Male, age 76, both hemispheres 299.0
2861 Female, age 67, both hemispheres 285.9
2620 Female, age 94, left hemisphere 216.8
2436 Male, age 74, both hemispheres 172.4
1891 Female, age 85, both hemispheres 165.0
Parahippocampal cortex
nTPM: 166.6
2245 Female, age 91, both hemispheres 246.4
2018 Male, age 76, both hemispheres 208.0
2250 Female, age 67, right hemisphere 165.9
1850 Male, age 80, both hemispheres 160.0
2622 Female, age 67, right hemisphere 159.2
1933 Female, age 85, both hemispheres 158.2
2693 Female, age 94, both hemispheres 147.5
2532 Female, age 72, left hemisphere 144.7
2692 Male, age 74, both hemispheres 138.6
1990 Female, age 91, right hemisphere 137.5
Perirhinal gyrus
nTPM: 164.0
1847 Female, age 91, left hemisphere 179.3
2521 Female, age 94, right hemisphere 177.2
1794 Male, age 80, right hemisphere 175.1
1841 Female, age 85, right hemisphere 152.5
2848 Male, age 76, right hemisphere 136.1
Subiculum
nTPM: 194.1
1901 Male, age 80, both hemispheres 286.3
2042 Male, age 76, both hemispheres 264.9
2438 Female, age 94, left hemisphere 176.7
2729 Female, age 91, right hemisphere 154.2
2619 Male, age 74, both hemispheres 145.2
1977 Female, age 85, both hemispheres 137.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 624.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 624.3
Samples: 197

Max nTPM: 1907.6
Min nTPM: 122.7
Std nTPM: 343.8
Median nTPM: 593.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1907.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 1621.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 1578.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 1440.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 1424.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 1397.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 1381.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 1362.6
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 1333.5
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 1326.2
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 1288.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 343.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 343.6
FF:10169-103B7 60 years, female 536.7
FF:10153-102I9 76 years, female 150.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 234.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 234.2
Samples: 4

Max nTPM: 308.4
Min nTPM: 189.3
Sample A Male 241.8
Sample B Male 308.4
Sample C Female 189.3
Sample D Female 197.2
Hippocampal formation
nTPM: 140.1
Samples: 4

Max nTPM: 178.1
Min nTPM: 114.3
Sample A Male 149.3
Sample B Male 114.3
Sample C Female 118.6
Sample D Female 178.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.5
68631948 Antisense, RP_050125_01_D08, Mouse strain C57BL/6J (56 days, male) 10.1
71015816 Antisense, RP_050725_02_H12, Mouse strain C57BL/6J (56 days, male) 9.0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.