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LRRC8D
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:30.6 nTPM
HPA:30.6 nTPM
GTEx:25.7 nTPM
FANTOM5:61.2 Scaled Tags Per Million
Pig:27.0 nTPM
Mouse:30.5 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.6
Sample id Sample description nTPM
Hippocampus
nTPM: 28.8
2148 Female, age 91, left hemisphere 32.0
1911 Female, age 85, right hemisphere 30.6
2621 Female, age 67, right hemisphere 29.9
1855 Male, age 76, left hemisphere 28.6
1898 Male, age 80, left hemisphere 27.8
2529 Female, age 94, left hemisphere 24.0
Dentate gyrus
nTPM: 30.6
2010 Male, age 76, both hemispheres 40.5
2530 Female, age 94, left hemisphere 34.6
1927 Female, age 91, both hemispheres 34.4
2528 Male, age 74, both hemispheres 26.6
2531 Female, age 67, both hemispheres 24.1
2246 Female, age 85, both hemispheres 23.3
Entorhinal gyrus
nTPM: 24.7
2117 Female, age 91, right hemisphere 35.7
2764 Male, age 80, right hemisphere 27.2
2613 Female, age 94, left hemisphere 25.4
1787 Male, age 76, left hemisphere 22.4
1938 Female, age 85, left hemisphere 21.5
2686 Male, age 75, right hemisphere 16.2
Hippocampus, CA1
nTPM: 29.6
2749 Male, age 80, left hemisphere 45.9
1873 Female, age 85, both hemispheres 32.2
2045 Male, age 76, both hemispheres 29.2
2527 Male, age 74, both hemispheres 25.6
2082 Female, age 91, right hemisphere 15.3
Hippocampus, CA2
nTPM: 29.0
1963 Male, age 80, left hemisphere 45.5
2249 Male, age 74, both hemispheres 31.5
1892 Male, age 76, both hemispheres 26.6
2437 Female, age 94, left hemisphere 25.3
1940 Female, age 85, left hemisphere 24.9
2113 Female, age 91, right hemisphere 20.2
Hippocampus, CA3
nTPM: 23.2
1891 Female, age 85, both hemispheres 29.6
2137 Male, age 80, left hemisphere 25.2
2620 Female, age 94, left hemisphere 24.8
1867 Male, age 76, both hemispheres 24.3
2436 Male, age 74, both hemispheres 18.1
2861 Female, age 67, both hemispheres 17.5
Parahippocampal cortex
nTPM: 20.3
2532 Female, age 72, left hemisphere 27.5
1990 Female, age 91, right hemisphere 25.8
1933 Female, age 85, both hemispheres 23.4
2692 Male, age 74, both hemispheres 22.1
2245 Female, age 91, both hemispheres 20.8
2018 Male, age 76, both hemispheres 19.7
1850 Male, age 80, both hemispheres 18.9
2693 Female, age 94, both hemispheres 17.0
2250 Female, age 67, right hemisphere 15.9
2622 Female, age 67, right hemisphere 12.3
Perirhinal gyrus
nTPM: 17.8
2848 Male, age 76, right hemisphere 19.6
1794 Male, age 80, right hemisphere 18.8
2521 Female, age 94, right hemisphere 18.2
1847 Female, age 91, left hemisphere 17.9
1841 Female, age 85, right hemisphere 14.5
Subiculum
nTPM: 30.4
2042 Male, age 76, both hemispheres 34.5
1901 Male, age 80, both hemispheres 34.0
1977 Female, age 85, both hemispheres 32.1
2438 Female, age 94, left hemisphere 31.3
2729 Female, age 91, right hemisphere 26.3
2619 Male, age 74, both hemispheres 23.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.7
Samples: 197

Max nTPM: 66.5
Min nTPM: 8.8
Std nTPM: 10.2
Median nTPM: 24.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 66.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 63.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 51.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 47.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 46.8
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 46.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 45.9
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 45.1
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 44.7
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 43.7
GTEX-1HBPI-0011-R1b-SM-A9SKF 50-59 years, male 42.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 61.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 61.2
FF:10169-103B7 60 years, female 65.9
FF:10153-102I9 76 years, female 56.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.0
Samples: 4

Max nTPM: 34.1
Min nTPM: 20.3
Sample A Female 34.1
Sample B Female 28.5
Sample C Male 25.0
Sample D Male 20.3
Entorhinal cortex
nTPM: 25.3
Samples: 4

Max nTPM: 28.0
Min nTPM: 21.3
Sample A Female 28.0
Sample B Female 24.0
Sample C Male 27.9
Sample D Male 21.3
Subiculum
nTPM: 24.3
Samples: 4

Max nTPM: 31.5
Min nTPM: 20.6
Sample A Female 31.5
Sample B Female 22.0
Sample C Male 23.0
Sample D Male 20.6
Ventral hippocampus
nTPM: 26.0
Samples: 4

Max nTPM: 31.8
Min nTPM: 19.3
Sample A Female 24.1
Sample B Female 19.3
Sample C Male 31.8
Sample D Male 28.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.5
Samples: 4

Max nTPM: 24.2
Min nTPM: 19.2
Sample A Male 21.2
Sample B Male 19.2
Sample C Female 21.2
Sample D Female 24.2
Hippocampal formation
nTPM: 30.5
Samples: 4

Max nTPM: 38.5
Min nTPM: 23.9
Sample A Male 23.9
Sample B Male 31.3
Sample C Female 38.5
Sample D Female 28.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
385997 Antisense, RP_040625_01_G07, Mouse strain C57BL/6J (56 days, male) 3.1

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