ABOUTMENU
HELP
NEWS
PPID
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:40.1 nTPM
HPA:40.1 nTPM
GTEx:32.3 nTPM
FANTOM5:53.2 Scaled Tags Per Million
Pig:24.3 nTPM
Mouse:80.8 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019520Antibody HPA019692
Glial cells MediumNot detected
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.1
Sample id Sample description nTPM
Hippocampus
nTPM: 37.7
2529 Female, age 94, left hemisphere 39.0
1898 Male, age 80, left hemisphere 38.4
2621 Female, age 67, right hemisphere 38.0
1911 Female, age 85, right hemisphere 37.3
2148 Female, age 91, left hemisphere 36.8
1855 Male, age 76, left hemisphere 36.4
Dentate gyrus
nTPM: 38.3
2528 Male, age 74, both hemispheres 39.7
2530 Female, age 94, left hemisphere 38.9
2010 Male, age 76, both hemispheres 38.8
1927 Female, age 91, both hemispheres 38.6
2246 Female, age 85, both hemispheres 38.1
2531 Female, age 67, both hemispheres 35.7
Entorhinal gyrus
nTPM: 37.3
1938 Female, age 85, left hemisphere 38.9
1787 Male, age 76, left hemisphere 38.8
2764 Male, age 80, right hemisphere 38.5
2117 Female, age 91, right hemisphere 37.4
2613 Female, age 94, left hemisphere 35.2
2686 Male, age 75, right hemisphere 34.9
Hippocampus, CA1
nTPM: 38.7
2749 Male, age 80, left hemisphere 40.5
2527 Male, age 74, both hemispheres 39.8
1873 Female, age 85, both hemispheres 38.5
2045 Male, age 76, both hemispheres 37.8
2082 Female, age 91, right hemisphere 36.8
Hippocampus, CA2
nTPM: 38.3
1892 Male, age 76, both hemispheres 39.5
2249 Male, age 74, both hemispheres 38.7
1963 Male, age 80, left hemisphere 38.3
1940 Female, age 85, left hemisphere 38.0
2437 Female, age 94, left hemisphere 37.9
2113 Female, age 91, right hemisphere 37.6
Hippocampus, CA3
nTPM: 37.5
1891 Female, age 85, both hemispheres 39.5
2436 Male, age 74, both hemispheres 38.5
1867 Male, age 76, both hemispheres 38.4
2137 Male, age 80, left hemisphere 38.4
2620 Female, age 94, left hemisphere 35.9
2861 Female, age 67, both hemispheres 34.2
Parahippocampal cortex
nTPM: 38.7
1850 Male, age 80, both hemispheres 40.8
2250 Female, age 67, right hemisphere 40.4
2018 Male, age 76, both hemispheres 40.2
1990 Female, age 91, right hemisphere 39.4
1933 Female, age 85, both hemispheres 39.3
2532 Female, age 72, left hemisphere 38.9
2692 Male, age 74, both hemispheres 37.8
2245 Female, age 91, both hemispheres 37.4
2693 Female, age 94, both hemispheres 36.7
2622 Female, age 67, right hemisphere 36.2
Perirhinal gyrus
nTPM: 40.1
2848 Male, age 76, right hemisphere 43.2
1841 Female, age 85, right hemisphere 42.2
1847 Female, age 91, left hemisphere 39.6
1794 Male, age 80, right hemisphere 39.0
2521 Female, age 94, right hemisphere 36.3
Subiculum
nTPM: 38.0
2619 Male, age 74, both hemispheres 38.9
1977 Female, age 85, both hemispheres 38.8
2042 Male, age 76, both hemispheres 38.7
1901 Male, age 80, both hemispheres 38.5
2438 Female, age 94, left hemisphere 37.9
2729 Female, age 91, right hemisphere 35.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.3
Samples: 197

Max nTPM: 127.4
Min nTPM: 20.4
Std nTPM: 10.7
Median nTPM: 30.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 127.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 84.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 83.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 62.5
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 60.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 60.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 55.8
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 46.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 44.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 43.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 42.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.2
FF:10153-102I9 76 years, female 57.2
FF:10169-103B7 60 years, female 49.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.3
Samples: 4

Max nTPM: 30.0
Min nTPM: 20.8
Sample A Female 30.0
Sample B Female 23.2
Sample C Male 20.8
Sample D Male 23.3
Entorhinal cortex
nTPM: 17.7
Samples: 4

Max nTPM: 18.7
Min nTPM: 16.5
Sample A Female 18.6
Sample B Female 18.7
Sample C Male 16.5
Sample D Male 16.9
Subiculum
nTPM: 20.0
Samples: 4

Max nTPM: 25.0
Min nTPM: 16.9
Sample A Female 25.0
Sample B Female 17.8
Sample C Male 16.9
Sample D Male 20.2
Ventral hippocampus
nTPM: 20.3
Samples: 4

Max nTPM: 25.0
Min nTPM: 16.4
Sample A Female 21.6
Sample B Female 16.4
Sample C Male 18.2
Sample D Male 25.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 80.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 69.8
Samples: 4

Max nTPM: 73.1
Min nTPM: 63.3
Sample A Male 63.3
Sample B Male 73.1
Sample C Female 72.8
Sample D Female 69.8
Hippocampal formation
nTPM: 80.8
Samples: 4

Max nTPM: 85.1
Min nTPM: 76.2
Sample A Male 80.3
Sample B Male 81.5
Sample C Female 85.1
Sample D Female 76.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
100145375 Antisense, RP_110519_02_F09, Mouse strain C57BL/6J (56 days, male) 0.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.