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MAP6
AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:68.3 nTPM
HPA:68.3 nTPM
GTEx:69.1 nTPM
FANTOM5:80.2 Scaled Tags Per Million
Pig:20.8 nTPM
Mouse:50.9 nTPM
Allen mouse:12.4 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 68.3
Sample id Sample description nTPM
Amygdala
nTPM: 53.0
1987 Female, age 91, left hemisphere 63.2
2517 Female, age 94, left hemisphere 54.5
2814 Male, age 76, right hemisphere 54.3
2514 Male, age 75, right hemisphere 50.4
2695 Female, age 67, right hemisphere 42.7
Basal amygdala
nTPM: 56.5
2243 Female, age 91, right hemisphere 67.2
2685 Female, age 94, left hemisphere 59.0
2110 Male, age 80, left hemisphere 55.5
1955 Male, age 76, both hemispheres 54.1
2609 Male, age 75, right hemisphere 54.1
2827 Female, age 67, right hemisphere 49.1
Central amygdala
nTPM: 56.2
2701 Female, age 91, right hemisphere 62.4
2239 Male, age 80, left hemisphere 59.3
2515 Male, age 75, right hemisphere 56.4
1905 Male, age 76, both hemispheres 51.7
2826 Female, age 94, left hemisphere 51.3
Corticomedial amygdala
nTPM: 63.8
2242 Female, age 91, right hemisphere 74.4
2535 Female, age 67, right hemisphere 71.0
2429 Female, age 94, left hemisphere 65.5
2829 Male, age 80, left hemisphere 62.0
2240 Male, age 76, both hemispheres 56.1
2428 Male, age 75, right hemisphere 53.9
Lateral amygdala
nTPM: 53.7
2255 Female, age 91, right hemisphere 61.2
2534 Female, age 94, left hemisphere 58.0
2256 Male, age 80, left hemisphere 56.9
1883 Male, age 76, both hemispheres 56.7
2516 Male, age 75, right hemisphere 49.7
2830 Female, age 67, right hemisphere 39.7
Stria terminalis, bed nucleus
nTPM: 68.3
2486 Female, age 94, both hemispheres 74.0
1974 Female, age 91, both hemispheres 70.9
2201 Male, age 74, unknown 60.2

AMYGDALA - GTEx RNA-seqi
Average nTPM 69.1
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 69.1
Samples: 152

Max nTPM: 141.6
Min nTPM: 3.8
Std nTPM: 18.6
Median nTPM: 69.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 141.6
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 122.7
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 112.1
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 105.8
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 105.3
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 104.2
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 103.3
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 96.0
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 95.7
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 95.4
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 94.8
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 80.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 80.3
FF:10151-102I7 76 years, female 80.2

AMYGDALA - Pig RNA-seqi
Average nTPM 20.8
Pig sample Sample description nTPM
Amygdala
nTPM: 20.9
Samples: 4

Max nTPM: 28.4
Min nTPM: 15.0
Sample A Female 28.4
Sample B Female 15.0
Sample C Male 18.7
Sample D Male 21.3

AMYGDALA - Mouse RNA-seqi
Average nTPM 50.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 50.9
Samples: 4

Max nTPM: 54.8
Min nTPM: 48.2
Sample A Male 50.6
Sample B Male 50.0
Sample C Female 54.8
Sample D Female 48.2

AMYGDALA - Allen Mouse ISHi
Max Expression energy 12.4
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 12.4
74580829 Antisense, RP_060215_02_A04, Mouse strain C57BL/6J (56 days, male) 12.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.