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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:33.2 nTPM
HPA:33.2 nTPM
GTEx:53.5 nTPM
FANTOM5:26.4 Scaled Tags Per Million
Pig:15.9 nTPM
Mouse:21.0 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035262Antibody CAB025497
Glial cells MediumLow
Neuronal cells Not detectedHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.2
Sample id Sample description nTPM
Hippocampus
nTPM: 31.7
2148 Female, age 91, left hemisphere 34.0
1898 Male, age 80, left hemisphere 33.2
2529 Female, age 94, left hemisphere 31.2
2621 Female, age 67, right hemisphere 30.9
1855 Male, age 76, left hemisphere 30.5
1911 Female, age 85, right hemisphere 30.4
Dentate gyrus
nTPM: 33.2
2531 Female, age 67, both hemispheres 35.9
2530 Female, age 94, left hemisphere 35.5
1927 Female, age 91, both hemispheres 34.3
2528 Male, age 74, both hemispheres 33.0
2010 Male, age 76, both hemispheres 31.1
2246 Female, age 85, both hemispheres 29.1
Entorhinal gyrus
nTPM: 33.0
2613 Female, age 94, left hemisphere 37.2
2764 Male, age 80, right hemisphere 35.8
1938 Female, age 85, left hemisphere 32.6
1787 Male, age 76, left hemisphere 31.8
2686 Male, age 75, right hemisphere 30.8
2117 Female, age 91, right hemisphere 29.6
Hippocampus, CA1
nTPM: 32.8
2749 Male, age 80, left hemisphere 39.0
2527 Male, age 74, both hemispheres 32.1
2045 Male, age 76, both hemispheres 31.5
1873 Female, age 85, both hemispheres 30.9
2082 Female, age 91, right hemisphere 30.3
Hippocampus, CA2
nTPM: 31.6
1963 Male, age 80, left hemisphere 40.3
1892 Male, age 76, both hemispheres 32.6
2437 Female, age 94, left hemisphere 30.4
2113 Female, age 91, right hemisphere 29.7
1940 Female, age 85, left hemisphere 28.6
2249 Male, age 74, both hemispheres 28.2
Hippocampus, CA3
nTPM: 32.8
2620 Female, age 94, left hemisphere 38.4
2137 Male, age 80, left hemisphere 34.9
2861 Female, age 67, both hemispheres 34.5
1867 Male, age 76, both hemispheres 30.7
2436 Male, age 74, both hemispheres 29.3
1891 Female, age 85, both hemispheres 28.8
Parahippocampal cortex
nTPM: 30.3
2532 Female, age 72, left hemisphere 31.7
2622 Female, age 67, right hemisphere 31.5
1933 Female, age 85, both hemispheres 31.0
1990 Female, age 91, right hemisphere 30.8
2245 Female, age 91, both hemispheres 30.5
1850 Male, age 80, both hemispheres 30.2
2693 Female, age 94, both hemispheres 29.6
2692 Male, age 74, both hemispheres 29.5
2018 Male, age 76, both hemispheres 29.2
2250 Female, age 67, right hemisphere 29.1
Perirhinal gyrus
nTPM: 31.7
1794 Male, age 80, right hemisphere 33.7
1847 Female, age 91, left hemisphere 32.5
1841 Female, age 85, right hemisphere 31.4
2521 Female, age 94, right hemisphere 31.4
2848 Male, age 76, right hemisphere 29.3
Subiculum
nTPM: 29.2
1977 Female, age 85, both hemispheres 30.7
2729 Female, age 91, right hemisphere 30.3
1901 Male, age 80, both hemispheres 30.1
2619 Male, age 74, both hemispheres 29.4
2042 Male, age 76, both hemispheres 27.7
2438 Female, age 94, left hemisphere 26.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 53.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 53.5
Samples: 197

Max nTPM: 117.3
Min nTPM: 16.4
Std nTPM: 17.8
Median nTPM: 51.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 117.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 105.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 102.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 91.9
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 90.2
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 88.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 88.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 84.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 83.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 82.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 82.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.4
FF:10153-102I9 76 years, female 28.8
FF:10169-103B7 60 years, female 24.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.9
Samples: 4

Max nTPM: 19.2
Min nTPM: 12.6
Sample A Female 19.2
Sample B Female 16.2
Sample C Male 15.4
Sample D Male 12.6
Entorhinal cortex
nTPM: 12.2
Samples: 4

Max nTPM: 12.9
Min nTPM: 11.5
Sample A Female 12.5
Sample B Female 12.9
Sample C Male 11.5
Sample D Male 11.9
Subiculum
nTPM: 12.3
Samples: 4

Max nTPM: 13.6
Min nTPM: 10.7
Sample A Female 13.6
Sample B Female 12.6
Sample C Male 12.3
Sample D Male 10.7
Ventral hippocampus
nTPM: 15.1
Samples: 4

Max nTPM: 17.6
Min nTPM: 12.5
Sample A Female 14.9
Sample B Female 12.5
Sample C Male 17.6
Sample D Male 15.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.4
Samples: 4

Max nTPM: 20.1
Min nTPM: 18.5
Sample A Male 18.9
Sample B Male 20.1
Sample C Female 20.1
Sample D Female 18.5
Hippocampal formation
nTPM: 21.0
Samples: 4

Max nTPM: 23.3
Min nTPM: 17.6
Sample A Male 17.6
Sample B Male 20.0
Sample C Female 23.3
Sample D Female 23.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
68638023 Antisense, RP_050126_02_A12, Mouse strain C57BL/6J (56 days, male) 1.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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