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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:128.0 nTPM
HPA:128.0 nTPM
GTEx:99.4 nTPM
FANTOM5:245.1 Scaled Tags Per Million
Pig:110.9 nTPM
Mouse:114.9 nTPM
Allen mouse:5.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001056Antibody CAB005081
Glial cells MediumMedium
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 128.0
Sample id Sample description nTPM
Hippocampus
nTPM: 99.5
1855 Male, age 76, left hemisphere 138.4
1898 Male, age 80, left hemisphere 106.3
1911 Female, age 85, right hemisphere 95.2
2529 Female, age 94, left hemisphere 88.7
2621 Female, age 67, right hemisphere 88.2
2148 Female, age 91, left hemisphere 80.4
Dentate gyrus
nTPM: 88.3
2010 Male, age 76, both hemispheres 110.1
2531 Female, age 67, both hemispheres 99.9
2246 Female, age 85, both hemispheres 97.9
1927 Female, age 91, both hemispheres 79.5
2528 Male, age 74, both hemispheres 75.4
2530 Female, age 94, left hemisphere 66.8
Entorhinal gyrus
nTPM: 83.1
1787 Male, age 76, left hemisphere 108.6
2764 Male, age 80, right hemisphere 88.1
1938 Female, age 85, left hemisphere 78.6
2686 Male, age 75, right hemisphere 75.1
2613 Female, age 94, left hemisphere 74.9
2117 Female, age 91, right hemisphere 73.6
Hippocampus, CA1
nTPM: 128.0
2749 Male, age 80, left hemisphere 192.6
2045 Male, age 76, both hemispheres 149.0
2082 Female, age 91, right hemisphere 103.3
1873 Female, age 85, both hemispheres 101.0
2527 Male, age 74, both hemispheres 93.8
Hippocampus, CA2
nTPM: 90.6
1892 Male, age 76, both hemispheres 107.3
1940 Female, age 85, left hemisphere 103.2
2113 Female, age 91, right hemisphere 99.3
1963 Male, age 80, left hemisphere 91.0
2249 Male, age 74, both hemispheres 73.2
2437 Female, age 94, left hemisphere 69.5
Hippocampus, CA3
nTPM: 118.0
2137 Male, age 80, left hemisphere 202.2
1867 Male, age 76, both hemispheres 131.1
2620 Female, age 94, left hemisphere 109.7
2861 Female, age 67, both hemispheres 102.8
1891 Female, age 85, both hemispheres 92.1
2436 Male, age 74, both hemispheres 69.9
Parahippocampal cortex
nTPM: 92.0
2018 Male, age 76, both hemispheres 155.7
2245 Female, age 91, both hemispheres 103.5
2250 Female, age 67, right hemisphere 97.0
1933 Female, age 85, both hemispheres 95.9
1850 Male, age 80, both hemispheres 95.0
2532 Female, age 72, left hemisphere 80.7
2693 Female, age 94, both hemispheres 77.2
2622 Female, age 67, right hemisphere 76.8
1990 Female, age 91, right hemisphere 70.2
2692 Male, age 74, both hemispheres 68.3
Perirhinal gyrus
nTPM: 111.1
1794 Male, age 80, right hemisphere 128.5
2521 Female, age 94, right hemisphere 110.4
1847 Female, age 91, left hemisphere 107.9
1841 Female, age 85, right hemisphere 105.8
2848 Male, age 76, right hemisphere 103.0
Subiculum
nTPM: 91.8
1901 Male, age 80, both hemispheres 122.5
2042 Male, age 76, both hemispheres 108.0
1977 Female, age 85, both hemispheres 90.3
2729 Female, age 91, right hemisphere 88.8
2619 Male, age 74, both hemispheres 73.9
2438 Female, age 94, left hemisphere 67.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 99.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 99.4
Samples: 197

Max nTPM: 181.4
Min nTPM: 18.2
Std nTPM: 29.6
Median nTPM: 97.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 181.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 180.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 179.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 176.7
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 169.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 162.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 162.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 153.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 153.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 153.0
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 150.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 245.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 245.1
FF:10169-103B7 60 years, female 308.6
FF:10153-102I9 76 years, female 181.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 110.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 93.7
Samples: 4

Max nTPM: 110.6
Min nTPM: 61.0
Sample A Female 110.6
Sample B Female 108.4
Sample C Male 94.8
Sample D Male 61.0
Entorhinal cortex
nTPM: 92.8
Samples: 4

Max nTPM: 102.7
Min nTPM: 86.3
Sample A Female 92.6
Sample B Female 86.3
Sample C Male 102.7
Sample D Male 89.6
Subiculum
nTPM: 100.9
Samples: 4

Max nTPM: 131.3
Min nTPM: 71.2
Sample A Female 131.3
Sample B Female 84.5
Sample C Male 116.4
Sample D Male 71.2
Ventral hippocampus
nTPM: 110.9
Samples: 4

Max nTPM: 137.5
Min nTPM: 85.6
Sample A Female 96.6
Sample B Female 85.6
Sample C Male 137.5
Sample D Male 123.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 114.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 114.9
Samples: 4

Max nTPM: 119.3
Min nTPM: 104.9
Sample A Male 116.7
Sample B Male 118.6
Sample C Female 104.9
Sample D Female 119.3
Hippocampal formation
nTPM: 81.1
Samples: 4

Max nTPM: 94.8
Min nTPM: 69.0
Sample A Male 94.8
Sample B Male 83.9
Sample C Female 69.0
Sample D Female 76.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.7
71358590 Antisense, RP_050725_03_E11, Mouse strain C57BL/6J (56 days, male) 6.2
68843841 Antisense, RP_050217_02_D03, Mouse strain C57BL/6J (56 days, male) 5.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.