Brain tissue expression of AFF1 in retina

RETINA - Expression summary

Protein expressionⁱ

No data

RNA expressionⁱ

Consensus:	63.6	nTPM
GTEx:	63.6	nTPM
FANTOM5:	223.2	Scaled Tags Per Million

Pig:	30.8	nTPM
Mouse:	29.2	nTPM

RETINA - Annotated protein expression
Pending normal tissue analysis

RETINA - GTEx RNA-seqⁱ

Average nTPM	63.6

GTEx sample id

Sample description

nTPM

Retina
Average nTPM: 63.6

Samples: 105

Max nTPM: 96.2
Min nTPM: 39.5
Std nTPM: 12.0
Median nTPM:

149_1	88 years, male	96.2
468_1	89 years, male	95.9
490_1	67 years, female	95.9
414_1	84 years, female	93.4
466_1	57 years, female	93.2
425_1	59 years, female	84.6
142_1	61 years, female	79.5
81_1	67 years, male	78.9
415_1	77 years, female	78.9
495_1	57 years, female	78.1
32_1	67 years, male	77.5
491_1	89 years, female	77.4
389_1	86 years, female	77.1
526_1	61 years, male	77.1
413_1	59 years, female	75.2
518_1	75 years, female	75.1
43_1	64 years, female	74.9
126_1	63 years, male	74.3
139_1	64 years, female	74.2
163_1	78 years, male	74.1
503_1	68 years, male	74.0
316_1	62 years, male	73.8
6_1	73 years, female	73.4
162_1	79 years, female	72.7
307_1	66 years, female	70.3
117_1	61 years, male	69.9
42_1	85 years, male	69.7
254_1	77 years, female	69.6
246_1	77 years, male	69.5
153_1	70 years, female	69.1
217_1	76 years, male	68.9
35_1	74 years, female	68.6
405_1	91 years, male	68.6
109_1	81 years, female	68.3
89_1	63 years, male	67.8
499_1	55 years, female	67.7
355_1	70 years, female	66.7
291_1	76 years, male	66.6
115_1	83 years, male	66.4
145_1	84 years, male	66.0
347_1	72 years, male	66.0
396_1	62 years, male	66.0
137_1	83 years, male	65.8
266_1	85 years, male	65.7
315_1	62 years, female	65.4
313_1	79 years, female	65.2
322_1	76 years, male	64.7
172_1	72 years, female	64.3
265_1	87 years, male	64.1
318_1	68 years, male	63.7
517_1	88 years, male	63.6
480_1	63 years, male	63.5
350_1	84 years, female	63.1
447_1	81 years, male	62.2
348_1	84 years, male	61.9
394_1	75 years, female	61.9
2_1	77 years, female	60.8
349_1	83 years, male	60.6
311_1	78 years, male	60.1
237_1	82 years, male	60.0
352_1	62 years, male	60.0
324_1	76 years, male	59.6
354_1	81 years, female	59.6
375_1	74 years, female	59.6
17_1	71 years, male	59.4
177_1	74 years, male	59.1
286_1	68 years, female	58.7
9_1	66 years, female	58.4
379_1	60 years, male	58.3
18_1	88 years, male	58.2
229_1	69 years, female	58.1
404_1	82 years, female	58.1
99_1	64 years, male	57.8
173_1	67 years, male	57.3
314_1	67 years, male	56.9
119_1	70 years, female	56.8
386_1	76 years, male	56.8
288_1	66 years, female	56.4
319_1	81 years, male	56.4
501_1	88 years, male	56.3
308_1	70 years, female	55.3
335_1	73 years, female	55.2
243_1	75 years, male	55.0
189_1	76 years, male	54.4
120_1	70 years, female	53.8
377_1	82 years, female	53.7
406_1	79 years, male	53.6
376_1	75 years, female	53.5
251_1	78 years, male	52.2
292_1	71 years, male	51.5
321_1	62 years, female	51.1
320_1	89 years, female	51.0
4_1	88 years, female	50.8
295_1	61 years, female	50.6
218_1	71 years, female	50.5
384_1	83 years, male	47.6
351_1	91 years, male	46.6
317_1	60 years, male	46.2
264_1	73 years, female	45.6
356_1	87 years, female	43.9
293_1	68 years, female	41.1
353_1	82 years, female	40.9
452_1	88 years, female	40.4
41_1	94 years, female	39.8
506_1	65 years, male	39.5
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RETINA - FANTOM5 CAGEⁱ

Max Scaled Tags Per Million	223.2

FANTOM5 sample id

Sample description

Scaled Tags Per Million

Retina
Scaled Tags Per Million: 223.2

FF:10030-101E3

24-65 years, mixed

223.2

RETINA - Pig RNA-seqⁱ

Average nTPM	30.8

Pig sample

Sample description

nTPM

Retina
nTPM: 30.8

Samples: 4

Max nTPM: 32.2
Min nTPM: 28.5

Sample A	Female	31.8
Sample B	Female	28.5
Sample C	Male	30.8
Sample D	Male	32.2

RETINA - Mouse RNA-seqⁱ

Average nTPM	29.2

Mouse sample

Sample description

nTPM

Retina
nTPM: 29.2

Samples: 4

Max nTPM: 37.3
Min nTPM: 21.7

Sample A	Male	21.7
Sample B	Male	33.9
Sample C	Female	23.7
Sample D	Female	37.3