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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:37.9 nTPM
HPA:37.9 nTPM
GTEx:27.3 nTPM
FANTOM5:12.8 Scaled Tags Per Million
Pig:12.9 nTPM
Mouse:40.2 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016953
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.9
Sample id Sample description nTPM
Hippocampus
nTPM: 37.6
2529 Female, age 94, left hemisphere 39.7
1855 Male, age 76, left hemisphere 38.0
1898 Male, age 80, left hemisphere 37.5
1911 Female, age 85, right hemisphere 37.3
2148 Female, age 91, left hemisphere 36.8
2621 Female, age 67, right hemisphere 36.2
Dentate gyrus
nTPM: 37.3
2528 Male, age 74, both hemispheres 39.1
2531 Female, age 67, both hemispheres 38.0
2530 Female, age 94, left hemisphere 37.9
1927 Female, age 91, both hemispheres 37.0
2246 Female, age 85, both hemispheres 36.1
2010 Male, age 76, both hemispheres 35.9
Entorhinal gyrus
nTPM: 37.9
2117 Female, age 91, right hemisphere 38.9
2764 Male, age 80, right hemisphere 38.7
1787 Male, age 76, left hemisphere 37.9
2686 Male, age 75, right hemisphere 37.8
1938 Female, age 85, left hemisphere 37.0
2613 Female, age 94, left hemisphere 37.0
Hippocampus, CA1
nTPM: 37.3
2527 Male, age 74, both hemispheres 39.4
2082 Female, age 91, right hemisphere 37.9
2749 Male, age 80, left hemisphere 37.3
1873 Female, age 85, both hemispheres 36.2
2045 Male, age 76, both hemispheres 35.7
Hippocampus, CA2
nTPM: 36.8
2437 Female, age 94, left hemisphere 38.3
2249 Male, age 74, both hemispheres 37.8
2113 Female, age 91, right hemisphere 37.5
1892 Male, age 76, both hemispheres 36.7
1963 Male, age 80, left hemisphere 35.6
1940 Female, age 85, left hemisphere 34.8
Hippocampus, CA3
nTPM: 37.8
2620 Female, age 94, left hemisphere 41.1
2436 Male, age 74, both hemispheres 37.8
2137 Male, age 80, left hemisphere 37.7
1891 Female, age 85, both hemispheres 37.0
1867 Male, age 76, both hemispheres 36.7
2861 Female, age 67, both hemispheres 36.7
Parahippocampal cortex
nTPM: 37.5
1990 Female, age 91, right hemisphere 39.2
2692 Male, age 74, both hemispheres 39.1
1850 Male, age 80, both hemispheres 38.2
2622 Female, age 67, right hemisphere 38.0
2245 Female, age 91, both hemispheres 37.3
2018 Male, age 76, both hemispheres 37.1
2250 Female, age 67, right hemisphere 36.9
1933 Female, age 85, both hemispheres 36.8
2532 Female, age 72, left hemisphere 36.8
2693 Female, age 94, both hemispheres 35.7
Perirhinal gyrus
nTPM: 37.9
1794 Male, age 80, right hemisphere 39.7
1841 Female, age 85, right hemisphere 38.4
1847 Female, age 91, left hemisphere 38.3
2521 Female, age 94, right hemisphere 36.6
2848 Male, age 76, right hemisphere 36.6
Subiculum
nTPM: 36.9
1901 Male, age 80, both hemispheres 38.6
2619 Male, age 74, both hemispheres 38.2
1977 Female, age 85, both hemispheres 37.5
2042 Male, age 76, both hemispheres 36.7
2729 Female, age 91, right hemisphere 36.1
2438 Female, age 94, left hemisphere 34.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.3
Samples: 197

Max nTPM: 49.8
Min nTPM: 14.5
Std nTPM: 4.1
Median nTPM: 27.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 49.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 40.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 38.2
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 37.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 35.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 35.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 35.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 35.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 34.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 34.6
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 33.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.8
FF:10153-102I9 76 years, female 15.2
FF:10169-103B7 60 years, female 10.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.9
Samples: 4

Max nTPM: 15.3
Min nTPM: 9.7
Sample A Female 15.3
Sample B Female 11.6
Sample C Male 14.9
Sample D Male 9.7
Entorhinal cortex
nTPM: 12.5
Samples: 4

Max nTPM: 14.2
Min nTPM: 11.4
Sample A Female 12.0
Sample B Female 14.2
Sample C Male 12.3
Sample D Male 11.4
Subiculum
nTPM: 12.3
Samples: 4

Max nTPM: 16.0
Min nTPM: 10.8
Sample A Female 16.0
Sample B Female 11.3
Sample C Male 10.8
Sample D Male 11.1
Ventral hippocampus
nTPM: 12.3
Samples: 4

Max nTPM: 14.9
Min nTPM: 10.5
Sample A Female 12.4
Sample B Female 10.5
Sample C Male 14.9
Sample D Male 11.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.5
Samples: 4

Max nTPM: 34.0
Min nTPM: 31.2
Sample A Male 31.8
Sample B Male 32.8
Sample C Female 34.0
Sample D Female 31.2
Hippocampal formation
nTPM: 40.3
Samples: 4

Max nTPM: 46.6
Min nTPM: 34.8
Sample A Male 46.6
Sample B Male 34.8
Sample C Female 39.3
Sample D Female 40.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
69735174 Antisense, RP_050503_02_C02, Mouse strain C57BL/6J (56 days, male) 1.1

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The Human Protein Atlas

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