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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:23.5 nTPM
HPA:23.5 nTPM
GTEx:23.4 nTPM
FANTOM5:20.8 Scaled Tags Per Million
Pig:6.7 nTPM
Mouse:23.7 nTPM
Allen mouse:3.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA077297
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.5
Sample id Sample description nTPM
Hippocampus
nTPM: 23.0
1898 Male, age 80, left hemisphere 25.5
2148 Female, age 91, left hemisphere 25.5
2621 Female, age 67, right hemisphere 22.6
1911 Female, age 85, right hemisphere 22.1
2529 Female, age 94, left hemisphere 21.9
1855 Male, age 76, left hemisphere 20.4
Dentate gyrus
nTPM: 22.3
2530 Female, age 94, left hemisphere 25.1
2528 Male, age 74, both hemispheres 23.6
1927 Female, age 91, both hemispheres 23.5
2531 Female, age 67, both hemispheres 21.2
2010 Male, age 76, both hemispheres 20.9
2246 Female, age 85, both hemispheres 19.7
Entorhinal gyrus
nTPM: 21.1
2686 Male, age 75, right hemisphere 23.2
2117 Female, age 91, right hemisphere 23.0
2764 Male, age 80, right hemisphere 22.3
2613 Female, age 94, left hemisphere 20.3
1787 Male, age 76, left hemisphere 19.3
1938 Female, age 85, left hemisphere 18.5
Hippocampus, CA1
nTPM: 22.5
2749 Male, age 80, left hemisphere 26.4
2527 Male, age 74, both hemispheres 23.8
1873 Female, age 85, both hemispheres 22.7
2082 Female, age 91, right hemisphere 20.8
2045 Male, age 76, both hemispheres 18.8
Hippocampus, CA2
nTPM: 23.4
1963 Male, age 80, left hemisphere 26.3
2437 Female, age 94, left hemisphere 24.1
1892 Male, age 76, both hemispheres 23.5
2249 Male, age 74, both hemispheres 23.0
1940 Female, age 85, left hemisphere 22.0
2113 Female, age 91, right hemisphere 21.6
Hippocampus, CA3
nTPM: 23.5
2436 Male, age 74, both hemispheres 27.6
2861 Female, age 67, both hemispheres 26.1
2137 Male, age 80, left hemisphere 22.6
1867 Male, age 76, both hemispheres 22.0
2620 Female, age 94, left hemisphere 21.3
1891 Female, age 85, both hemispheres 21.1
Parahippocampal cortex
nTPM: 20.6
2692 Male, age 74, both hemispheres 22.8
2622 Female, age 67, right hemisphere 21.8
1990 Female, age 91, right hemisphere 21.7
1933 Female, age 85, both hemispheres 21.5
2693 Female, age 94, both hemispheres 20.8
2250 Female, age 67, right hemisphere 20.5
2018 Male, age 76, both hemispheres 19.6
2245 Female, age 91, both hemispheres 19.5
2532 Female, age 72, left hemisphere 19.5
1850 Male, age 80, both hemispheres 18.2
Perirhinal gyrus
nTPM: 18.2
1847 Female, age 91, left hemisphere 18.8
2521 Female, age 94, right hemisphere 18.5
1794 Male, age 80, right hemisphere 18.3
1841 Female, age 85, right hemisphere 17.9
2848 Male, age 76, right hemisphere 17.4
Subiculum
nTPM: 22.1
1901 Male, age 80, both hemispheres 23.9
2729 Female, age 91, right hemisphere 23.9
2619 Male, age 74, both hemispheres 23.5
2042 Male, age 76, both hemispheres 21.1
2438 Female, age 94, left hemisphere 20.4
1977 Female, age 85, both hemispheres 20.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.4
Samples: 197

Max nTPM: 39.6
Min nTPM: 12.1
Std nTPM: 5.4
Median nTPM: 22.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 39.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 38.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 38.6
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 36.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 36.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 34.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 34.2
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 34.0
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 33.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 33.3
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 33.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.8
FF:10169-103B7 60 years, female 24.0
FF:10153-102I9 76 years, female 17.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.4
Samples: 4

Max nTPM: 6.8
Min nTPM: 3.9
Sample A Female 6.8
Sample B Female 5.2
Sample C Male 5.7
Sample D Male 3.9
Entorhinal cortex
nTPM: 6.7
Samples: 4

Max nTPM: 8.5
Min nTPM: 5.7
Sample A Female 5.7
Sample B Female 8.5
Sample C Male 6.5
Sample D Male 5.9
Subiculum
nTPM: 5.1
Samples: 4

Max nTPM: 6.1
Min nTPM: 4.5
Sample A Female 6.1
Sample B Female 4.5
Sample C Male 4.8
Sample D Male 5.0
Ventral hippocampus
nTPM: 6.1
Samples: 4

Max nTPM: 8.1
Min nTPM: 4.2
Sample A Female 6.3
Sample B Female 4.2
Sample C Male 8.1
Sample D Male 5.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 23.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.8
Samples: 4

Max nTPM: 29.3
Min nTPM: 17.3
Sample A Male 26.9
Sample B Male 29.3
Sample C Female 21.5
Sample D Female 17.3
Hippocampal formation
nTPM: 22.8
Samples: 4

Max nTPM: 26.8
Min nTPM: 19.6
Sample A Male 19.6
Sample B Male 23.1
Sample C Female 21.6
Sample D Female 26.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.3
1352 Antisense, RP_Baylor_103149, Mouse strain C57BL/6J (56 days, male) 3.3
1351 Antisense, RP_Baylor_103149, Mouse strain C57BL/6J (56 days, male) 0.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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