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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:13.2 nTPM
HPA:13.2 nTPM
GTEx:10.0 nTPM
FANTOM5:41.2 Scaled Tags Per Million
Pig:16.1 nTPM
Mouse:15.6 nTPM
Allen mouse:1.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011008Antibody HPA011555
Glial cells LowMedium
Neuronal cells MediumMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 13.2
Sample id Sample description nTPM
Hippocampus
nTPM: 7.4
2148 Female, age 91, left hemisphere 9.1
1898 Male, age 80, left hemisphere 8.8
1911 Female, age 85, right hemisphere 8.2
2621 Female, age 67, right hemisphere 7.3
2529 Female, age 94, left hemisphere 5.9
1855 Male, age 76, left hemisphere 5.0
Dentate gyrus
nTPM: 6.6
2531 Female, age 67, both hemispheres 8.2
1927 Female, age 91, both hemispheres 7.5
2246 Female, age 85, both hemispheres 7.3
2528 Male, age 74, both hemispheres 6.6
2010 Male, age 76, both hemispheres 6.2
2530 Female, age 94, left hemisphere 3.7
Entorhinal gyrus
nTPM: 13.2
2613 Female, age 94, left hemisphere 19.5
1938 Female, age 85, left hemisphere 16.3
1787 Male, age 76, left hemisphere 13.5
2686 Male, age 75, right hemisphere 11.3
2764 Male, age 80, right hemisphere 10.2
2117 Female, age 91, right hemisphere 8.6
Hippocampus, CA1
nTPM: 7.1
2527 Male, age 74, both hemispheres 9.6
2749 Male, age 80, left hemisphere 8.5
1873 Female, age 85, both hemispheres 6.0
2082 Female, age 91, right hemisphere 5.7
2045 Male, age 76, both hemispheres 5.6
Hippocampus, CA2
nTPM: 6.4
1963 Male, age 80, left hemisphere 8.8
1892 Male, age 76, both hemispheres 7.0
1940 Female, age 85, left hemisphere 6.4
2113 Female, age 91, right hemisphere 6.4
2249 Male, age 74, both hemispheres 5.1
2437 Female, age 94, left hemisphere 4.6
Hippocampus, CA3
nTPM: 7.3
2436 Male, age 74, both hemispheres 8.9
2137 Male, age 80, left hemisphere 8.0
2861 Female, age 67, both hemispheres 7.8
1891 Female, age 85, both hemispheres 7.3
1867 Male, age 76, both hemispheres 6.8
2620 Female, age 94, left hemisphere 5.2
Parahippocampal cortex
nTPM: 11.0
1850 Male, age 80, both hemispheres 15.1
1990 Female, age 91, right hemisphere 13.9
2622 Female, age 67, right hemisphere 13.1
2693 Female, age 94, both hemispheres 12.7
1933 Female, age 85, both hemispheres 11.3
2532 Female, age 72, left hemisphere 10.1
2692 Male, age 74, both hemispheres 8.8
2245 Female, age 91, both hemispheres 8.6
2018 Male, age 76, both hemispheres 8.3
2250 Female, age 67, right hemisphere 7.8
Perirhinal gyrus
nTPM: 12.3
1841 Female, age 85, right hemisphere 15.8
2848 Male, age 76, right hemisphere 14.6
1847 Female, age 91, left hemisphere 12.5
1794 Male, age 80, right hemisphere 11.3
2521 Female, age 94, right hemisphere 7.5
Subiculum
nTPM: 6.8
1977 Female, age 85, both hemispheres 9.3
1901 Male, age 80, both hemispheres 8.2
2619 Male, age 74, both hemispheres 8.2
2729 Female, age 91, right hemisphere 8.0
2042 Male, age 76, both hemispheres 4.4
2438 Female, age 94, left hemisphere 2.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.0
Samples: 197

Max nTPM: 17.3
Min nTPM: 5.2
Std nTPM: 1.8
Median nTPM: 9.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 17.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 15.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 14.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 14.1
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 14.0
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 13.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 13.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 13.5
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 13.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 13.3
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 13.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.2
FF:10153-102I9 76 years, female 47.8
FF:10169-103B7 60 years, female 34.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.0
Samples: 4

Max nTPM: 19.3
Min nTPM: 12.7
Sample A Female 17.0
Sample B Female 14.8
Sample C Male 19.3
Sample D Male 12.7
Entorhinal cortex
nTPM: 15.8
Samples: 4

Max nTPM: 16.7
Min nTPM: 14.2
Sample A Female 16.7
Sample B Female 15.9
Sample C Male 14.2
Sample D Male 16.2
Subiculum
nTPM: 16.2
Samples: 4

Max nTPM: 18.5
Min nTPM: 14.6
Sample A Female 18.5
Sample B Female 15.0
Sample C Male 14.6
Sample D Male 16.5
Ventral hippocampus
nTPM: 13.6
Samples: 4

Max nTPM: 16.5
Min nTPM: 10.5
Sample A Female 14.9
Sample B Female 12.5
Sample C Male 10.5
Sample D Male 16.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 19.8
Min nTPM: 12.8
Sample A Male 14.9
Sample B Male 14.8
Sample C Female 12.8
Sample D Female 19.8
Hippocampal formation
nTPM: 12.8
Samples: 4

Max nTPM: 15.3
Min nTPM: 10.4
Sample A Male 10.4
Sample B Male 15.3
Sample C Female 14.5
Sample D Female 10.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.6
71587757 Antisense, RP_050915_04_H04, Mouse strain C57BL/6J (56 days, male) 1.6

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The Human Protein Atlas

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