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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		53.861
RNA expressioni
Consensus:215.6 nTPM
HPA:215.6 nTPM
GTEx:533.9 nTPM
FANTOM5:580.6 Scaled Tags Per Million
Pig:7.7 nTPM
Mouse:8.9 nTPM
Allen mouse:1.5 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA014404
Amygdala mean intensity 53.861
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 16.313
Basal medial amygdaloid nucleus 21.463
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 19.215
Cortical amygdala 13.610
Central amygdala 53.861
Medial amygdaloid nucleus 7.869

AMYGDALA - HPA Brain RNA-seq
Max nTPM 215.6
Sample id Sample description nTPM
Amygdala
nTPM: 181.0
2814 Male, age 76, right hemisphere 315.3
2517 Female, age 94, left hemisphere 183.5
2514 Male, age 75, right hemisphere 166.7
1987 Female, age 91, left hemisphere 134.1
2695 Female, age 67, right hemisphere 105.2
Basal amygdala
nTPM: 215.6
2243 Female, age 91, right hemisphere 257.6
2609 Male, age 75, right hemisphere 248.1
1955 Male, age 76, both hemispheres 213.9
2110 Male, age 80, left hemisphere 208.6
2685 Female, age 94, left hemisphere 204.0
2827 Female, age 67, right hemisphere 161.2
Central amygdala
nTPM: 205.3
1905 Male, age 76, both hemispheres 279.1
2239 Male, age 80, left hemisphere 211.9
2826 Female, age 94, left hemisphere 210.3
2701 Female, age 91, right hemisphere 170.0
2515 Male, age 75, right hemisphere 155.2
Corticomedial amygdala
nTPM: 190.4
2535 Female, age 67, right hemisphere 216.6
2428 Male, age 75, right hemisphere 214.6
2429 Female, age 94, left hemisphere 211.1
2829 Male, age 80, left hemisphere 206.3
2240 Male, age 76, both hemispheres 193.1
2242 Female, age 91, right hemisphere 100.9
Lateral amygdala
nTPM: 189.3
1883 Male, age 76, both hemispheres 266.0
2534 Female, age 94, left hemisphere 234.2
2516 Male, age 75, right hemisphere 209.8
2255 Female, age 91, right hemisphere 160.3
2830 Female, age 67, right hemisphere 138.2
2256 Male, age 80, left hemisphere 127.3
Stria terminalis, bed nucleus
nTPM: 151.1
1974 Female, age 91, both hemispheres 186.7
2201 Male, age 74, unknown 148.2
2486 Female, age 94, both hemispheres 118.5

AMYGDALA - GTEx RNA-seqi
Average nTPM 533.9
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 533.9
Samples: 152

Max nTPM: 1592.6
Min nTPM: 54.5
Std nTPM: 264.8
Median nTPM: 482.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 1592.6
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 1582.5
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 1520.8
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 1384.2
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 1078.1
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 1020.5
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 1018.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 1001.2
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 954.7
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 937.2
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 922.2
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 580.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 580.6
FF:10151-102I7 76 years, female 580.6

AMYGDALA - Pig RNA-seqi
Average nTPM 7.7
Pig sample Sample description nTPM
Amygdala
nTPM: 7.8
Samples: 4

Max nTPM: 11.9
Min nTPM: 5.6
Sample A Female 11.9
Sample B Female 5.6
Sample C Male 7.3
Sample D Male 6.3

AMYGDALA - Mouse RNA-seqi
Average nTPM 8.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 8.9
Samples: 4

Max nTPM: 12.2
Min nTPM: 6.3
Sample A Male 12.2
Sample B Male 7.1
Sample C Female 9.9
Sample D Female 6.3

AMYGDALA - Allen Mouse ISHi
Max Expression energy 1.5
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 1.5
68545693 Antisense, RP_050120_01_D05, Mouse strain C57BL/6J (56 days, male) 2.6
72081426 Antisense, RP_051017_01_C05, Mouse strain C57BL/6J (56 days, male) 0.4

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.