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NAA20
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:40.2 nTPM
HPA:40.2 nTPM
GTEx:20.3 nTPM
FANTOM5:42.9 Scaled Tags Per Million
Pig:56.3 nTPM
Mouse:89.6 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.2
Sample id Sample description nTPM
Hippocampus
nTPM: 37.8
1898 Male, age 80, left hemisphere 40.7
1911 Female, age 85, right hemisphere 38.6
2621 Female, age 67, right hemisphere 37.7
2529 Female, age 94, left hemisphere 37.4
1855 Male, age 76, left hemisphere 36.7
2148 Female, age 91, left hemisphere 35.6
Dentate gyrus
nTPM: 37.7
2010 Male, age 76, both hemispheres 40.1
1927 Female, age 91, both hemispheres 39.2
2528 Male, age 74, both hemispheres 39.2
2530 Female, age 94, left hemisphere 36.8
2246 Female, age 85, both hemispheres 36.6
2531 Female, age 67, both hemispheres 34.4
Entorhinal gyrus
nTPM: 36.5
1938 Female, age 85, left hemisphere 38.7
1787 Male, age 76, left hemisphere 37.4
2764 Male, age 80, right hemisphere 37.4
2117 Female, age 91, right hemisphere 36.8
2613 Female, age 94, left hemisphere 35.3
2686 Male, age 75, right hemisphere 33.5
Hippocampus, CA1
nTPM: 39.8
2749 Male, age 80, left hemisphere 44.8
1873 Female, age 85, both hemispheres 39.9
2527 Male, age 74, both hemispheres 39.3
2045 Male, age 76, both hemispheres 39.1
2082 Female, age 91, right hemisphere 36.0
Hippocampus, CA2
nTPM: 39.7
1892 Male, age 76, both hemispheres 45.5
2249 Male, age 74, both hemispheres 41.9
1963 Male, age 80, left hemisphere 38.7
2437 Female, age 94, left hemisphere 38.6
1940 Female, age 85, left hemisphere 37.3
2113 Female, age 91, right hemisphere 36.0
Hippocampus, CA3
nTPM: 39.7
2436 Male, age 74, both hemispheres 45.7
1867 Male, age 76, both hemispheres 43.3
2137 Male, age 80, left hemisphere 39.8
1891 Female, age 85, both hemispheres 38.5
2620 Female, age 94, left hemisphere 38.0
2861 Female, age 67, both hemispheres 33.0
Parahippocampal cortex
nTPM: 37.6
1850 Male, age 80, both hemispheres 40.9
2018 Male, age 76, both hemispheres 40.1
2250 Female, age 67, right hemisphere 39.7
2245 Female, age 91, both hemispheres 38.7
1933 Female, age 85, both hemispheres 37.8
1990 Female, age 91, right hemisphere 37.8
2693 Female, age 94, both hemispheres 37.8
2532 Female, age 72, left hemisphere 36.5
2692 Male, age 74, both hemispheres 34.5
2622 Female, age 67, right hemisphere 32.7
Perirhinal gyrus
nTPM: 40.2
1841 Female, age 85, right hemisphere 42.1
1847 Female, age 91, left hemisphere 41.8
1794 Male, age 80, right hemisphere 39.8
2521 Female, age 94, right hemisphere 39.2
2848 Male, age 76, right hemisphere 38.1
Subiculum
nTPM: 38.1
1901 Male, age 80, both hemispheres 39.9
1977 Female, age 85, both hemispheres 39.0
2438 Female, age 94, left hemisphere 38.1
2619 Male, age 74, both hemispheres 37.8
2042 Male, age 76, both hemispheres 37.5
2729 Female, age 91, right hemisphere 36.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.3
Samples: 197

Max nTPM: 43.9
Min nTPM: 6.7
Std nTPM: 7.9
Median nTPM: 18.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 43.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 42.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 41.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 40.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 38.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 38.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 38.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 36.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 36.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 36.2
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 36.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.9
FF:10169-103B7 60 years, female 51.2
FF:10153-102I9 76 years, female 34.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 56.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 56.3
Samples: 4

Max nTPM: 68.7
Min nTPM: 39.9
Sample A Female 68.7
Sample B Female 53.1
Sample C Male 63.5
Sample D Male 39.9
Entorhinal cortex
nTPM: 50.0
Samples: 4

Max nTPM: 64.1
Min nTPM: 39.0
Sample A Female 53.1
Sample B Female 64.1
Sample C Male 43.9
Sample D Male 39.0
Subiculum
nTPM: 46.5
Samples: 4

Max nTPM: 65.1
Min nTPM: 37.6
Sample A Female 65.1
Sample B Female 37.6
Sample C Male 38.8
Sample D Male 44.4
Ventral hippocampus
nTPM: 47.6
Samples: 4

Max nTPM: 55.3
Min nTPM: 35.1
Sample A Female 52.0
Sample B Female 35.1
Sample C Male 47.9
Sample D Male 55.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 89.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 89.7
Samples: 4

Max nTPM: 96.4
Min nTPM: 83.8
Sample A Male 84.5
Sample B Male 93.9
Sample C Female 96.4
Sample D Female 83.8
Hippocampal formation
nTPM: 88.7
Samples: 4

Max nTPM: 109.4
Min nTPM: 79.5
Sample A Male 109.4
Sample B Male 80.3
Sample C Female 79.5
Sample D Female 85.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
512770 Antisense, RP_040809_02_D08, Mouse strain C57BL/6J (56 days, male) 1.9

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