ABOUTMENU
HELP
NEWS
UQCRH
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:410.2 nTPM
HPA:410.2 nTPM
GTEx:272.1 nTPM
FANTOM5:359.5 Scaled Tags Per Million
Pig:223.0 nTPM
Mouse:835.6 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042574
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 410.2
Sample id Sample description nTPM
Hippocampus
nTPM: 397.9
1898 Male, age 80, left hemisphere 417.6
2529 Female, age 94, left hemisphere 403.2
2621 Female, age 67, right hemisphere 394.6
1855 Male, age 76, left hemisphere 393.6
2148 Female, age 91, left hemisphere 390.9
1911 Female, age 85, right hemisphere 387.5
Dentate gyrus
nTPM: 394.4
2010 Male, age 76, both hemispheres 402.6
1927 Female, age 91, both hemispheres 401.9
2530 Female, age 94, left hemisphere 397.5
2246 Female, age 85, both hemispheres 391.9
2531 Female, age 67, both hemispheres 388.9
2528 Male, age 74, both hemispheres 383.4
Entorhinal gyrus
nTPM: 395.8
2764 Male, age 80, right hemisphere 402.6
2686 Male, age 75, right hemisphere 401.0
1938 Female, age 85, left hemisphere 399.6
1787 Male, age 76, left hemisphere 398.5
2613 Female, age 94, left hemisphere 388.3
2117 Female, age 91, right hemisphere 384.5
Hippocampus, CA1
nTPM: 400.3
2749 Male, age 80, left hemisphere 425.8
1873 Female, age 85, both hemispheres 397.8
2527 Male, age 74, both hemispheres 397.8
2045 Male, age 76, both hemispheres 391.2
2082 Female, age 91, right hemisphere 388.8
Hippocampus, CA2
nTPM: 401.3
1892 Male, age 76, both hemispheres 421.5
1963 Male, age 80, left hemisphere 414.0
2249 Male, age 74, both hemispheres 399.2
2437 Female, age 94, left hemisphere 397.0
1940 Female, age 85, left hemisphere 388.9
2113 Female, age 91, right hemisphere 387.5
Hippocampus, CA3
nTPM: 397.6
1867 Male, age 76, both hemispheres 406.6
2137 Male, age 80, left hemisphere 405.4
2436 Male, age 74, both hemispheres 402.1
1891 Female, age 85, both hemispheres 395.1
2861 Female, age 67, both hemispheres 391.3
2620 Female, age 94, left hemisphere 385.0
Parahippocampal cortex
nTPM: 398.9
1850 Male, age 80, both hemispheres 413.0
2532 Female, age 72, left hemisphere 403.2
2245 Female, age 91, both hemispheres 402.2
1990 Female, age 91, right hemisphere 401.7
1933 Female, age 85, both hemispheres 400.5
2250 Female, age 67, right hemisphere 400.2
2018 Male, age 76, both hemispheres 397.0
2693 Female, age 94, both hemispheres 392.9
2622 Female, age 67, right hemisphere 388.9
2692 Male, age 74, both hemispheres 388.9
Perirhinal gyrus
nTPM: 410.2
1847 Female, age 91, left hemisphere 425.2
1794 Male, age 80, right hemisphere 420.4
1841 Female, age 85, right hemisphere 411.4
2848 Male, age 76, right hemisphere 398.1
2521 Female, age 94, right hemisphere 395.7
Subiculum
nTPM: 395.1
2438 Female, age 94, left hemisphere 407.9
1901 Male, age 80, both hemispheres 403.8
1977 Female, age 85, both hemispheres 398.4
2619 Male, age 74, both hemispheres 390.6
2042 Male, age 76, both hemispheres 388.2
2729 Female, age 91, right hemisphere 381.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 272.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 272.1
Samples: 197

Max nTPM: 1018.1
Min nTPM: 110.2
Std nTPM: 112.1
Median nTPM: 245.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1018.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 684.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 581.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 561.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 500.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 500.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 489.2
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 489.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 483.2
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 465.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 457.5
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 359.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 359.5
FF:10169-103B7 60 years, female 440.5
FF:10153-102I9 76 years, female 278.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 223.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 223.0
Samples: 4

Max nTPM: 313.5
Min nTPM: 159.6
Sample A Female 313.5
Sample B Female 205.3
Sample C Male 213.5
Sample D Male 159.6
Entorhinal cortex
nTPM: 204.8
Samples: 4

Max nTPM: 263.3
Min nTPM: 157.0
Sample A Female 203.9
Sample B Female 263.3
Sample C Male 195.1
Sample D Male 157.0
Subiculum
nTPM: 178.2
Samples: 4

Max nTPM: 258.7
Min nTPM: 139.8
Sample A Female 258.7
Sample B Female 164.5
Sample C Male 139.8
Sample D Male 149.8
Ventral hippocampus
nTPM: 201.9
Samples: 4

Max nTPM: 242.6
Min nTPM: 151.3
Sample A Female 242.6
Sample B Female 151.3
Sample C Male 220.1
Sample D Male 193.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 835.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 800.0
Samples: 4

Max nTPM: 895.0
Min nTPM: 749.5
Sample A Male 749.5
Sample B Male 801.6
Sample C Female 895.0
Sample D Female 753.8
Hippocampal formation
nTPM: 835.7
Samples: 4

Max nTPM: 934.0
Min nTPM: 725.1
Sample A Male 934.0
Sample B Male 725.1
Sample C Female 804.7
Sample D Female 878.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
77340502 Antisense, RP_070116_02_D11, Mouse strain C57BL/6J (56 days, male) 2.4
71763912 Antisense, RP_050921_02_H02, Mouse strain C57BL/6J (56 days, male) 2.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.