ABOUTMENU
HELP
NEWS
ATP5MD
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:526.1 nTPM
HPA:526.1 nTPM
GTEx:547.1 nTPM
FANTOM5:228.9 Scaled Tags Per Million
Pig:121.5 nTPM
Mouse:1528.1 nTPM
Allen mouse:10.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 526.1
Sample id Sample description nTPM
Hippocampus
nTPM: 498.6
1898 Male, age 80, left hemisphere 526.7
1855 Male, age 76, left hemisphere 505.9
1911 Female, age 85, right hemisphere 495.6
2529 Female, age 94, left hemisphere 495.0
2621 Female, age 67, right hemisphere 489.6
2148 Female, age 91, left hemisphere 478.8
Dentate gyrus
nTPM: 502.1
1927 Female, age 91, both hemispheres 521.0
2010 Male, age 76, both hemispheres 517.6
2246 Female, age 85, both hemispheres 499.6
2528 Male, age 74, both hemispheres 497.6
2530 Female, age 94, left hemisphere 492.9
2531 Female, age 67, both hemispheres 483.6
Entorhinal gyrus
nTPM: 488.5
2764 Male, age 80, right hemisphere 499.1
1938 Female, age 85, left hemisphere 498.3
1787 Male, age 76, left hemisphere 497.9
2613 Female, age 94, left hemisphere 481.7
2686 Male, age 75, right hemisphere 480.0
2117 Female, age 91, right hemisphere 473.9
Hippocampus, CA1
nTPM: 509.7
2749 Male, age 80, left hemisphere 544.4
1873 Female, age 85, both hemispheres 517.0
2527 Male, age 74, both hemispheres 502.9
2045 Male, age 76, both hemispheres 502.2
2082 Female, age 91, right hemisphere 482.2
Hippocampus, CA2
nTPM: 503.9
1892 Male, age 76, both hemispheres 528.0
1963 Male, age 80, left hemisphere 521.4
2249 Male, age 74, both hemispheres 509.2
2437 Female, age 94, left hemisphere 491.7
1940 Female, age 85, left hemisphere 491.3
2113 Female, age 91, right hemisphere 481.7
Hippocampus, CA3
nTPM: 502.1
1867 Male, age 76, both hemispheres 520.0
2137 Male, age 80, left hemisphere 515.2
2436 Male, age 74, both hemispheres 512.9
1891 Female, age 85, both hemispheres 504.8
2620 Female, age 94, left hemisphere 488.0
2861 Female, age 67, both hemispheres 471.7
Parahippocampal cortex
nTPM: 498.6
1850 Male, age 80, both hemispheres 528.7
2250 Female, age 67, right hemisphere 517.8
1933 Female, age 85, both hemispheres 511.4
1990 Female, age 91, right hemisphere 510.8
2018 Male, age 76, both hemispheres 500.9
2693 Female, age 94, both hemispheres 495.1
2245 Female, age 91, both hemispheres 489.6
2532 Female, age 72, left hemisphere 485.2
2692 Male, age 74, both hemispheres 477.1
2622 Female, age 67, right hemisphere 469.6
Perirhinal gyrus
nTPM: 526.1
1847 Female, age 91, left hemisphere 542.5
1794 Male, age 80, right hemisphere 536.4
1841 Female, age 85, right hemisphere 536.3
2521 Female, age 94, right hemisphere 514.5
2848 Male, age 76, right hemisphere 500.9
Subiculum
nTPM: 497.4
2438 Female, age 94, left hemisphere 513.3
1977 Female, age 85, both hemispheres 507.5
1901 Male, age 80, both hemispheres 505.8
2042 Male, age 76, both hemispheres 490.4
2729 Female, age 91, right hemisphere 484.5
2619 Male, age 74, both hemispheres 483.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 547.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 547.1
Samples: 197

Max nTPM: 2810.0
Min nTPM: 218.1
Std nTPM: 246.0
Median nTPM: 520.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2810.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1316.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1177.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 1138.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 975.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 951.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 929.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 927.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 926.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 921.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 915.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 228.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 228.9
FF:10169-103B7 60 years, female 309.7
FF:10153-102I9 76 years, female 148.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 121.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 121.5
Samples: 4

Max nTPM: 162.7
Min nTPM: 87.7
Sample A Female 162.7
Sample B Female 111.3
Sample C Male 124.4
Sample D Male 87.7
Entorhinal cortex
nTPM: 120.0
Samples: 4

Max nTPM: 175.5
Min nTPM: 86.5
Sample A Female 106.7
Sample B Female 175.5
Sample C Male 111.4
Sample D Male 86.5
Subiculum
nTPM: 106.6
Samples: 4

Max nTPM: 149.6
Min nTPM: 81.8
Sample A Female 149.6
Sample B Female 109.2
Sample C Male 85.6
Sample D Male 81.8
Ventral hippocampus
nTPM: 106.4
Samples: 4

Max nTPM: 128.3
Min nTPM: 88.8
Sample A Female 128.3
Sample B Female 88.8
Sample C Male 98.7
Sample D Male 109.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1528.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1444.0
Samples: 4

Max nTPM: 1610.4
Min nTPM: 1316.5
Sample A Male 1351.1
Sample B Male 1497.9
Sample C Female 1610.4
Sample D Female 1316.5
Hippocampal formation
nTPM: 1528.0
Samples: 4

Max nTPM: 1978.0
Min nTPM: 1371.4
Sample A Male 1978.0
Sample B Male 1383.0
Sample C Female 1371.4
Sample D Female 1379.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.1
68203444 Antisense, RP_041018_01_C03, Mouse strain C57BL/6J (56 days, male) 10.1
67862431 Antisense, RP_041018_01_C03, Mouse strain C57BL/6J (56 days, male) 9.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.