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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:28.0 nTPM
HPA:28.0 nTPM
GTEx:23.0 nTPM
FANTOM5:64.6 Scaled Tags Per Million
Pig:13.3 nTPM
Mouse:32.7 nTPM
Allen mouse:15.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038680
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.0
Sample id Sample description nTPM
Hippocampus
nTPM: 27.3
2529 Female, age 94, left hemisphere 28.8
2148 Female, age 91, left hemisphere 27.6
1898 Male, age 80, left hemisphere 27.4
2621 Female, age 67, right hemisphere 27.0
1911 Female, age 85, right hemisphere 26.4
1855 Male, age 76, left hemisphere 26.3
Dentate gyrus
nTPM: 26.8
2530 Female, age 94, left hemisphere 27.7
2531 Female, age 67, both hemispheres 27.6
2246 Female, age 85, both hemispheres 26.8
2010 Male, age 76, both hemispheres 26.6
2528 Male, age 74, both hemispheres 26.4
1927 Female, age 91, both hemispheres 25.7
Entorhinal gyrus
nTPM: 28.0
2764 Male, age 80, right hemisphere 29.6
2117 Female, age 91, right hemisphere 28.8
1787 Male, age 76, left hemisphere 28.6
1938 Female, age 85, left hemisphere 27.5
2686 Male, age 75, right hemisphere 26.9
2613 Female, age 94, left hemisphere 26.3
Hippocampus, CA1
nTPM: 27.0
2749 Male, age 80, left hemisphere 28.6
2045 Male, age 76, both hemispheres 26.7
2082 Female, age 91, right hemisphere 26.7
1873 Female, age 85, both hemispheres 26.6
2527 Male, age 74, both hemispheres 26.5
Hippocampus, CA2
nTPM: 27.0
2437 Female, age 94, left hemisphere 27.9
1940 Female, age 85, left hemisphere 27.8
2113 Female, age 91, right hemisphere 27.6
1963 Male, age 80, left hemisphere 26.6
1892 Male, age 76, both hemispheres 26.4
2249 Male, age 74, both hemispheres 26.0
Hippocampus, CA3
nTPM: 26.7
2436 Male, age 74, both hemispheres 28.1
1891 Female, age 85, both hemispheres 27.7
2620 Female, age 94, left hemisphere 26.4
2137 Male, age 80, left hemisphere 26.2
1867 Male, age 76, both hemispheres 26.1
2861 Female, age 67, both hemispheres 25.9
Parahippocampal cortex
nTPM: 26.8
1850 Male, age 80, both hemispheres 27.7
2245 Female, age 91, both hemispheres 27.7
2692 Male, age 74, both hemispheres 27.7
2532 Female, age 72, left hemisphere 27.5
1990 Female, age 91, right hemisphere 26.9
1933 Female, age 85, both hemispheres 26.7
2018 Male, age 76, both hemispheres 26.7
2622 Female, age 67, right hemisphere 26.7
2250 Female, age 67, right hemisphere 25.8
2693 Female, age 94, both hemispheres 25.0
Perirhinal gyrus
nTPM: 26.9
1794 Male, age 80, right hemisphere 27.6
1841 Female, age 85, right hemisphere 27.1
1847 Female, age 91, left hemisphere 27.1
2521 Female, age 94, right hemisphere 26.6
2848 Male, age 76, right hemisphere 26.2
Subiculum
nTPM: 27.4
1901 Male, age 80, both hemispheres 28.1
2619 Male, age 74, both hemispheres 28.1
2438 Female, age 94, left hemisphere 28.0
1977 Female, age 85, both hemispheres 27.5
2042 Male, age 76, both hemispheres 26.7
2729 Female, age 91, right hemisphere 26.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.0
Samples: 197

Max nTPM: 43.7
Min nTPM: 16.1
Std nTPM: 4.3
Median nTPM: 22.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 43.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 39.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 38.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 35.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 35.2
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 34.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 33.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 32.6
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 31.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 31.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 31.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 64.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 64.6
FF:10169-103B7 60 years, female 64.8
FF:10153-102I9 76 years, female 64.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 13.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.3
Samples: 4

Max nTPM: 16.9
Min nTPM: 10.7
Sample A Female 16.9
Sample B Female 12.6
Sample C Male 13.1
Sample D Male 10.7
Entorhinal cortex
nTPM: 12.2
Samples: 4

Max nTPM: 13.3
Min nTPM: 10.5
Sample A Female 13.3
Sample B Female 13.0
Sample C Male 12.0
Sample D Male 10.5
Subiculum
nTPM: 11.1
Samples: 4

Max nTPM: 15.1
Min nTPM: 9.0
Sample A Female 15.1
Sample B Female 10.2
Sample C Male 10.2
Sample D Male 9.0
Ventral hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 14.5
Min nTPM: 9.0
Sample A Female 11.1
Sample B Female 9.0
Sample C Male 14.5
Sample D Male 13.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.2
Samples: 4

Max nTPM: 32.9
Min nTPM: 29.6
Sample A Male 32.9
Sample B Male 32.0
Sample C Female 30.3
Sample D Female 29.6
Hippocampal formation
nTPM: 32.7
Samples: 4

Max nTPM: 34.3
Min nTPM: 30.1
Sample A Male 30.1
Sample B Male 34.3
Sample C Female 33.1
Sample D Female 33.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.6
69262305 Antisense, RP_050303_01_H01, Mouse strain C57BL/6J (56 days, male) 15.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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