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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:37.5 nTPM
HPA:37.5 nTPM
GTEx:34.8 nTPM
FANTOM5:98.6 Scaled Tags Per Million
Pig:24.0 nTPM
Mouse:50.4 nTPM
Allen mouse:4.4 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 37.5
Sample id Sample description nTPM
Amygdala
nTPM: 37.2
2814 Male, age 76, right hemisphere 45.1
2514 Male, age 75, right hemisphere 36.0
1987 Female, age 91, left hemisphere 35.5
2517 Female, age 94, left hemisphere 35.3
2695 Female, age 67, right hemisphere 34.2
Basal amygdala
nTPM: 37.3
2243 Female, age 91, right hemisphere 40.9
2685 Female, age 94, left hemisphere 38.9
2110 Male, age 80, left hemisphere 38.4
1955 Male, age 76, both hemispheres 37.9
2609 Male, age 75, right hemisphere 34.6
2827 Female, age 67, right hemisphere 33.0
Central amygdala
nTPM: 37.2
2239 Male, age 80, left hemisphere 39.7
1905 Male, age 76, both hemispheres 39.2
2701 Female, age 91, right hemisphere 37.4
2515 Male, age 75, right hemisphere 36.7
2826 Female, age 94, left hemisphere 33.2
Corticomedial amygdala
nTPM: 37.5
2829 Male, age 80, left hemisphere 42.1
2242 Female, age 91, right hemisphere 39.9
2240 Male, age 76, both hemispheres 38.3
2429 Female, age 94, left hemisphere 37.2
2535 Female, age 67, right hemisphere 34.6
2428 Male, age 75, right hemisphere 33.2
Lateral amygdala
nTPM: 35.8
1883 Male, age 76, both hemispheres 37.9
2255 Female, age 91, right hemisphere 37.7
2256 Male, age 80, left hemisphere 37.1
2516 Male, age 75, right hemisphere 36.9
2534 Female, age 94, left hemisphere 33.8
2830 Female, age 67, right hemisphere 31.6
Stria terminalis, bed nucleus
nTPM: 36.9
2201 Male, age 74, unknown 38.5
2486 Female, age 94, both hemispheres 38.2
1974 Female, age 91, both hemispheres 33.9

AMYGDALA - GTEx RNA-seqi
Average nTPM 34.8
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 34.8
Samples: 152

Max nTPM: 54.3
Min nTPM: 19.3
Std nTPM: 6.1
Median nTPM: 33.6
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 54.3
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 52.9
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 51.4
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 50.8
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 47.6
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 47.4
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 47.4
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 47.3
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 46.7
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 45.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 45.1
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 98.6
FF:10151-102I7 76 years, female 98.6

AMYGDALA - Pig RNA-seqi
Average nTPM 24.0
Pig sample Sample description nTPM
Amygdala
nTPM: 24.0
Samples: 4

Max nTPM: 27.1
Min nTPM: 22.2
Sample A Female 27.1
Sample B Female 22.2
Sample C Male 23.1
Sample D Male 23.5

AMYGDALA - Mouse RNA-seqi
Average nTPM 50.4
Mouse sample Sample description nTPM
Amygdala
nTPM: 50.4
Samples: 4

Max nTPM: 51.9
Min nTPM: 49.5
Sample A Male 50.5
Sample B Male 51.9
Sample C Female 49.8
Sample D Female 49.5

AMYGDALA - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 4.4
81599624 Antisense, RP_071127_04_H06, Mouse strain C57BL/6J (56 days, male) 5.1
68269068 Antisense, RP_041208_01_H07, Mouse strain C57BL/6J (56 days, male) 3.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.