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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:24.9 nTPM
HPA:24.9 nTPM
GTEx:20.2 nTPM
FANTOM5:74.2 Scaled Tags Per Million
Mouse:16.0 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026842Antibody HPA027930
Glial cells Not detectedNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.9
Sample id Sample description nTPM
Hippocampus
nTPM: 24.9
2529 Female, age 94, left hemisphere 26.7
2621 Female, age 67, right hemisphere 25.8
1911 Female, age 85, right hemisphere 25.0
1898 Male, age 80, left hemisphere 24.5
1855 Male, age 76, left hemisphere 24.4
2148 Female, age 91, left hemisphere 22.9
Dentate gyrus
nTPM: 23.3
2010 Male, age 76, both hemispheres 26.2
2246 Female, age 85, both hemispheres 24.8
2530 Female, age 94, left hemisphere 24.8
2528 Male, age 74, both hemispheres 22.2
2531 Female, age 67, both hemispheres 21.7
1927 Female, age 91, both hemispheres 20.1
Entorhinal gyrus
nTPM: 22.5
2117 Female, age 91, right hemisphere 25.7
1787 Male, age 76, left hemisphere 23.6
2686 Male, age 75, right hemisphere 22.4
1938 Female, age 85, left hemisphere 21.6
2764 Male, age 80, right hemisphere 21.3
2613 Female, age 94, left hemisphere 20.5
Hippocampus, CA1
nTPM: 22.7
2527 Male, age 74, both hemispheres 25.7
2045 Male, age 76, both hemispheres 23.2
1873 Female, age 85, both hemispheres 22.7
2082 Female, age 91, right hemisphere 22.6
2749 Male, age 80, left hemisphere 19.4
Hippocampus, CA2
nTPM: 23.1
2249 Male, age 74, both hemispheres 25.5
1940 Female, age 85, left hemisphere 24.0
2113 Female, age 91, right hemisphere 23.5
2437 Female, age 94, left hemisphere 23.4
1963 Male, age 80, left hemisphere 21.4
1892 Male, age 76, both hemispheres 21.1
Hippocampus, CA3
nTPM: 22.3
2436 Male, age 74, both hemispheres 24.5
1891 Female, age 85, both hemispheres 23.9
2861 Female, age 67, both hemispheres 21.9
2620 Female, age 94, left hemisphere 21.5
1867 Male, age 76, both hemispheres 21.2
2137 Male, age 80, left hemisphere 21.1
Parahippocampal cortex
nTPM: 22.9
2018 Male, age 76, both hemispheres 25.3
2622 Female, age 67, right hemisphere 24.3
2532 Female, age 72, left hemisphere 23.9
2250 Female, age 67, right hemisphere 23.7
2245 Female, age 91, both hemispheres 23.5
2692 Male, age 74, both hemispheres 22.5
1990 Female, age 91, right hemisphere 21.7
2693 Female, age 94, both hemispheres 21.7
1933 Female, age 85, both hemispheres 21.5
1850 Male, age 80, both hemispheres 21.0
Perirhinal gyrus
nTPM: 21.5
2521 Female, age 94, right hemisphere 23.2
2848 Male, age 76, right hemisphere 21.6
1841 Female, age 85, right hemisphere 21.2
1794 Male, age 80, right hemisphere 21.1
1847 Female, age 91, left hemisphere 20.4
Subiculum
nTPM: 23.6
2438 Female, age 94, left hemisphere 25.9
2042 Male, age 76, both hemispheres 25.6
2619 Male, age 74, both hemispheres 23.5
2729 Female, age 91, right hemisphere 22.9
1901 Male, age 80, both hemispheres 22.8
1977 Female, age 85, both hemispheres 21.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.2
Samples: 197

Max nTPM: 48.2
Min nTPM: 7.9
Std nTPM: 6.0
Median nTPM: 19.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 48.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 47.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 42.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 41.6
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 37.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 33.1
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 31.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 31.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 30.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 29.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 29.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.2
FF:10153-102I9 76 years, female 79.3
FF:10169-103B7 60 years, female 69.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.8
Samples: 4

Max nTPM: 14.8
Min nTPM: 13.0
Sample A Male 13.9
Sample B Male 14.8
Sample C Female 13.4
Sample D Female 13.0
Hippocampal formation
nTPM: 16.0
Samples: 4

Max nTPM: 18.2
Min nTPM: 13.2
Sample A Male 15.6
Sample B Male 18.2
Sample C Female 16.8
Sample D Female 13.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
68910980 Antisense, RP_050118_03_A12, Mouse strain C57BL/6J (56 days, male) 0.1
71022864 Antisense, RP_050719_01_F10, Mouse strain C57BL/6J (56 days, male) 0.0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.