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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:343.0 nTPM
HPA:343.0 nTPM
GTEx:366.0 nTPM
FANTOM5:308.8 Scaled Tags Per Million
Pig:276.1 nTPM
Mouse:112.6 nTPM
Allen mouse:3.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030528Antibody CAB020787
Glial cells LowLow
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 343.0
Sample id Sample description nTPM
Hippocampus
nTPM: 317.2
2529 Female, age 94, left hemisphere 360.8
1911 Female, age 85, right hemisphere 332.5
1898 Male, age 80, left hemisphere 312.5
2621 Female, age 67, right hemisphere 311.9
1855 Male, age 76, left hemisphere 296.7
2148 Female, age 91, left hemisphere 288.7
Dentate gyrus
nTPM: 303.2
2530 Female, age 94, left hemisphere 375.6
2528 Male, age 74, both hemispheres 318.5
2010 Male, age 76, both hemispheres 307.6
2246 Female, age 85, both hemispheres 300.1
2531 Female, age 67, both hemispheres 265.9
1927 Female, age 91, both hemispheres 251.3
Entorhinal gyrus
nTPM: 324.6
2117 Female, age 91, right hemisphere 399.6
2764 Male, age 80, right hemisphere 332.4
1938 Female, age 85, left hemisphere 310.7
1787 Male, age 76, left hemisphere 309.7
2686 Male, age 75, right hemisphere 297.8
2613 Female, age 94, left hemisphere 297.7
Hippocampus, CA1
nTPM: 286.1
2527 Male, age 74, both hemispheres 325.0
1873 Female, age 85, both hemispheres 299.7
2082 Female, age 91, right hemisphere 279.1
2749 Male, age 80, left hemisphere 264.6
2045 Male, age 76, both hemispheres 262.2
Hippocampus, CA2
nTPM: 298.4
2249 Male, age 74, both hemispheres 337.7
2437 Female, age 94, left hemisphere 320.9
1963 Male, age 80, left hemisphere 305.1
2113 Female, age 91, right hemisphere 288.7
1940 Female, age 85, left hemisphere 282.0
1892 Male, age 76, both hemispheres 255.9
Hippocampus, CA3
nTPM: 277.9
1891 Female, age 85, both hemispheres 323.4
2620 Female, age 94, left hemisphere 284.2
1867 Male, age 76, both hemispheres 281.4
2436 Male, age 74, both hemispheres 274.1
2861 Female, age 67, both hemispheres 262.7
2137 Male, age 80, left hemisphere 241.5
Parahippocampal cortex
nTPM: 298.4
2692 Male, age 74, both hemispheres 342.0
2532 Female, age 72, left hemisphere 320.2
2018 Male, age 76, both hemispheres 306.7
1933 Female, age 85, both hemispheres 300.5
2245 Female, age 91, both hemispheres 293.1
1990 Female, age 91, right hemisphere 292.9
2693 Female, age 94, both hemispheres 287.4
1850 Male, age 80, both hemispheres 285.4
2250 Female, age 67, right hemisphere 285.4
2622 Female, age 67, right hemisphere 270.8
Perirhinal gyrus
nTPM: 271.0
2848 Male, age 76, right hemisphere 288.7
2521 Female, age 94, right hemisphere 275.9
1794 Male, age 80, right hemisphere 271.4
1847 Female, age 91, left hemisphere 261.4
1841 Female, age 85, right hemisphere 257.8
Subiculum
nTPM: 343.0
2042 Male, age 76, both hemispheres 394.1
1901 Male, age 80, both hemispheres 347.0
2619 Male, age 74, both hemispheres 340.4
1977 Female, age 85, both hemispheres 333.6
2438 Female, age 94, left hemisphere 326.1
2729 Female, age 91, right hemisphere 316.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 366.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 366.0
Samples: 197

Max nTPM: 1022.9
Min nTPM: 91.2
Std nTPM: 149.8
Median nTPM: 341.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 1022.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 883.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 824.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 815.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 795.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 751.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 748.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 658.6
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 619.8
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 601.7
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 601.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 308.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 308.8
FF:10153-102I9 76 years, female 337.2
FF:10169-103B7 60 years, female 280.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 276.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 276.1
Samples: 4

Max nTPM: 449.6
Min nTPM: 97.6
Sample A Female 449.6
Sample B Female 172.1
Sample C Male 385.2
Sample D Male 97.6
Entorhinal cortex
nTPM: 130.9
Samples: 4

Max nTPM: 149.1
Min nTPM: 103.9
Sample A Female 103.9
Sample B Female 149.1
Sample C Male 144.9
Sample D Male 125.6
Subiculum
nTPM: 166.9
Samples: 4

Max nTPM: 220.0
Min nTPM: 126.3
Sample A Female 220.0
Sample B Female 164.4
Sample C Male 126.3
Sample D Male 157.0
Ventral hippocampus
nTPM: 184.6
Samples: 4

Max nTPM: 220.3
Min nTPM: 104.1
Sample A Female 205.8
Sample B Female 104.1
Sample C Male 208.1
Sample D Male 220.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 112.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 112.6
Samples: 4

Max nTPM: 144.8
Min nTPM: 94.3
Sample A Male 94.3
Sample B Male 105.3
Sample C Female 105.9
Sample D Female 144.8
Hippocampal formation
nTPM: 96.3
Samples: 4

Max nTPM: 102.2
Min nTPM: 90.9
Sample A Male 102.2
Sample B Male 90.9
Sample C Female 92.1
Sample D Female 100.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.6
671 Antisense, RP_Baylor_102908, Mouse strain C57BL/6J (56 days, male) 6.8
670 Antisense, RP_Baylor_102908, Mouse strain C57BL/6J (56 days, male) 5.9
672 Sense, RPS_Baylor_37014, Mouse strain C57BL/6J (56 days, male) 0.4

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.