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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:81.4 nTPM
HPA:81.4 nTPM
GTEx:89.7 nTPM
FANTOM5:232.4 Scaled Tags Per Million
Pig:92.7 nTPM
Mouse:269.7 nTPM
Allen mouse:27.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039715Antibody HPA040040
Glial cells Not detectedMedium
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 81.4
Sample id Sample description nTPM
Hippocampus
nTPM: 73.8
1898 Male, age 80, left hemisphere 83.6
2529 Female, age 94, left hemisphere 77.9
2148 Female, age 91, left hemisphere 71.8
1855 Male, age 76, left hemisphere 71.0
2621 Female, age 67, right hemisphere 70.6
1911 Female, age 85, right hemisphere 68.1
Dentate gyrus
nTPM: 73.7
1927 Female, age 91, both hemispheres 78.1
2530 Female, age 94, left hemisphere 77.9
2528 Male, age 74, both hemispheres 75.8
2010 Male, age 76, both hemispheres 73.7
2246 Female, age 85, both hemispheres 70.0
2531 Female, age 67, both hemispheres 67.0
Entorhinal gyrus
nTPM: 74.9
2764 Male, age 80, right hemisphere 83.4
1938 Female, age 85, left hemisphere 76.0
2117 Female, age 91, right hemisphere 75.0
1787 Male, age 76, left hemisphere 74.6
2613 Female, age 94, left hemisphere 73.0
2686 Male, age 75, right hemisphere 67.3
Hippocampus, CA1
nTPM: 76.2
2749 Male, age 80, left hemisphere 90.5
1873 Female, age 85, both hemispheres 77.4
2527 Male, age 74, both hemispheres 76.8
2082 Female, age 91, right hemisphere 68.4
2045 Male, age 76, both hemispheres 67.9
Hippocampus, CA2
nTPM: 76.7
1892 Male, age 76, both hemispheres 84.3
1963 Male, age 80, left hemisphere 82.1
2249 Male, age 74, both hemispheres 78.5
2437 Female, age 94, left hemisphere 75.5
1940 Female, age 85, left hemisphere 71.0
2113 Female, age 91, right hemisphere 69.0
Hippocampus, CA3
nTPM: 72.8
2137 Male, age 80, left hemisphere 80.2
1867 Male, age 76, both hemispheres 76.3
2436 Male, age 74, both hemispheres 73.3
1891 Female, age 85, both hemispheres 70.5
2620 Female, age 94, left hemisphere 70.4
2861 Female, age 67, both hemispheres 65.9
Parahippocampal cortex
nTPM: 73.8
1850 Male, age 80, both hemispheres 84.0
1990 Female, age 91, right hemisphere 77.5
1933 Female, age 85, both hemispheres 76.2
2245 Female, age 91, both hemispheres 75.5
2250 Female, age 67, right hemisphere 74.3
2532 Female, age 72, left hemisphere 73.7
2693 Female, age 94, both hemispheres 72.7
2018 Male, age 76, both hemispheres 70.4
2692 Male, age 74, both hemispheres 67.4
2622 Female, age 67, right hemisphere 66.7
Perirhinal gyrus
nTPM: 81.4
1794 Male, age 80, right hemisphere 88.2
1847 Female, age 91, left hemisphere 87.3
1841 Female, age 85, right hemisphere 79.5
2521 Female, age 94, right hemisphere 76.4
2848 Male, age 76, right hemisphere 75.8
Subiculum
nTPM: 72.9
1901 Male, age 80, both hemispheres 78.8
1977 Female, age 85, both hemispheres 75.8
2619 Male, age 74, both hemispheres 73.9
2438 Female, age 94, left hemisphere 72.4
2729 Female, age 91, right hemisphere 69.2
2042 Male, age 76, both hemispheres 67.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 89.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 89.7
Samples: 197

Max nTPM: 151.2
Min nTPM: 45.4
Std nTPM: 21.5
Median nTPM: 84.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 151.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 149.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 142.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 139.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 137.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 137.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 134.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 133.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 132.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 131.1
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 130.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 232.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 232.4
FF:10169-103B7 60 years, female 271.0
FF:10153-102I9 76 years, female 193.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 92.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 92.7
Samples: 4

Max nTPM: 127.8
Min nTPM: 67.4
Sample A Female 127.8
Sample B Female 85.1
Sample C Male 90.4
Sample D Male 67.4
Entorhinal cortex
nTPM: 78.0
Samples: 4

Max nTPM: 87.9
Min nTPM: 63.1
Sample A Female 83.0
Sample B Female 87.9
Sample C Male 77.9
Sample D Male 63.1
Subiculum
nTPM: 77.8
Samples: 4

Max nTPM: 101.9
Min nTPM: 66.3
Sample A Female 101.9
Sample B Female 73.6
Sample C Male 69.5
Sample D Male 66.3
Ventral hippocampus
nTPM: 83.4
Samples: 4

Max nTPM: 97.0
Min nTPM: 61.9
Sample A Female 90.4
Sample B Female 61.9
Sample C Male 97.0
Sample D Male 84.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 269.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 249.9
Samples: 4

Max nTPM: 266.9
Min nTPM: 221.1
Sample A Male 249.8
Sample B Male 266.9
Sample C Female 261.8
Sample D Female 221.1
Hippocampal formation
nTPM: 269.7
Samples: 4

Max nTPM: 290.6
Min nTPM: 254.8
Sample A Male 290.6
Sample B Male 265.5
Sample C Female 254.8
Sample D Female 268.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 27.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 27.2
545090 Antisense, RP_040810_02_H09, Mouse strain C57BL/6J (56 days, male) 27.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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