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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:33.4 nTPM
HPA:33.4 nTPM
GTEx:43.5 nTPM
FANTOM5:31.7 Scaled Tags Per Million
Pig:12.0 nTPM
Mouse:27.8 nTPM
Allen mouse:3.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030685
Glial cells High
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.4
Sample id Sample description nTPM
Hippocampus
nTPM: 31.0
2529 Female, age 94, left hemisphere 33.3
1855 Male, age 76, left hemisphere 32.2
1898 Male, age 80, left hemisphere 31.9
2621 Female, age 67, right hemisphere 31.0
2148 Female, age 91, left hemisphere 29.3
1911 Female, age 85, right hemisphere 28.3
Dentate gyrus
nTPM: 31.5
2528 Male, age 74, both hemispheres 34.1
2530 Female, age 94, left hemisphere 33.7
2010 Male, age 76, both hemispheres 30.8
2531 Female, age 67, both hemispheres 30.8
2246 Female, age 85, both hemispheres 29.9
1927 Female, age 91, both hemispheres 29.7
Entorhinal gyrus
nTPM: 33.2
2613 Female, age 94, left hemisphere 38.7
2764 Male, age 80, right hemisphere 37.8
1938 Female, age 85, left hemisphere 32.1
2686 Male, age 75, right hemisphere 31.1
1787 Male, age 76, left hemisphere 31.0
2117 Female, age 91, right hemisphere 28.3
Hippocampus, CA1
nTPM: 30.6
2749 Male, age 80, left hemisphere 33.2
2045 Male, age 76, both hemispheres 30.6
1873 Female, age 85, both hemispheres 29.9
2082 Female, age 91, right hemisphere 29.8
2527 Male, age 74, both hemispheres 29.3
Hippocampus, CA2
nTPM: 30.4
1963 Male, age 80, left hemisphere 33.5
2437 Female, age 94, left hemisphere 32.1
2249 Male, age 74, both hemispheres 30.3
2113 Female, age 91, right hemisphere 30.0
1892 Male, age 76, both hemispheres 28.4
1940 Female, age 85, left hemisphere 28.3
Hippocampus, CA3
nTPM: 31.2
2620 Female, age 94, left hemisphere 36.5
2861 Female, age 67, both hemispheres 34.3
2137 Male, age 80, left hemisphere 30.4
2436 Male, age 74, both hemispheres 30.4
1891 Female, age 85, both hemispheres 28.2
1867 Male, age 76, both hemispheres 27.6
Parahippocampal cortex
nTPM: 30.1
2622 Female, age 67, right hemisphere 32.7
1933 Female, age 85, both hemispheres 32.6
2245 Female, age 91, both hemispheres 32.5
2693 Female, age 94, both hemispheres 30.2
2250 Female, age 67, right hemisphere 30.0
2018 Male, age 76, both hemispheres 29.7
1850 Male, age 80, both hemispheres 29.3
2532 Female, age 72, left hemisphere 29.1
1990 Female, age 91, right hemisphere 28.2
2692 Male, age 74, both hemispheres 27.0
Perirhinal gyrus
nTPM: 33.4
1794 Male, age 80, right hemisphere 36.0
2521 Female, age 94, right hemisphere 35.7
1847 Female, age 91, left hemisphere 34.7
1841 Female, age 85, right hemisphere 30.5
2848 Male, age 76, right hemisphere 30.1
Subiculum
nTPM: 29.0
1977 Female, age 85, both hemispheres 30.7
2438 Female, age 94, left hemisphere 29.8
2042 Male, age 76, both hemispheres 29.7
2729 Female, age 91, right hemisphere 28.6
2619 Male, age 74, both hemispheres 28.2
1901 Male, age 80, both hemispheres 26.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.5
Samples: 197

Max nTPM: 107.2
Min nTPM: 17.0
Std nTPM: 16.0
Median nTPM: 40.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 107.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 99.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 86.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 84.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 79.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 79.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 79.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 78.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 78.3
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 75.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 73.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.7
FF:10153-102I9 76 years, female 33.1
FF:10169-103B7 60 years, female 30.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.5
Samples: 4

Max nTPM: 12.8
Min nTPM: 10.3
Sample A Female 10.7
Sample B Female 12.8
Sample C Male 10.3
Sample D Male 12.3
Entorhinal cortex
nTPM: 11.6
Samples: 4

Max nTPM: 12.1
Min nTPM: 11.0
Sample A Female 11.5
Sample B Female 11.0
Sample C Male 11.6
Sample D Male 12.1
Subiculum
nTPM: 11.2
Samples: 4

Max nTPM: 11.5
Min nTPM: 10.8
Sample A Female 11.0
Sample B Female 11.5
Sample C Male 11.3
Sample D Male 10.8
Ventral hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 13.3
Min nTPM: 11.0
Sample A Female 11.0
Sample B Female 12.5
Sample C Male 13.3
Sample D Male 11.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.9
Samples: 4

Max nTPM: 29.9
Min nTPM: 25.1
Sample A Male 26.9
Sample B Male 29.5
Sample C Female 25.1
Sample D Female 29.9
Hippocampal formation
nTPM: 23.5
Samples: 4

Max nTPM: 24.6
Min nTPM: 22.7
Sample A Male 23.0
Sample B Male 24.6
Sample C Female 22.7
Sample D Female 23.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.1
69262255 Antisense, RP_050301_02_A03, Mouse strain C57BL/6J (56 days, male) 3.1

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