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TP53I11
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:24.7 nTPM
HPA:24.7 nTPM
GTEx:16.6 nTPM
FANTOM5:19.5 Scaled Tags Per Million
Pig:24.4 nTPM
Mouse:43.6 nTPM
Allen mouse:6.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059727Antibody HPA061276
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 24.7
Sample id Sample description nTPM
Hippocampus
nTPM: 14.5
2621 Female, age 67, right hemisphere 19.3
2148 Female, age 91, left hemisphere 19.0
1855 Male, age 76, left hemisphere 15.8
1911 Female, age 85, right hemisphere 13.1
1898 Male, age 80, left hemisphere 11.7
2529 Female, age 94, left hemisphere 7.9
Dentate gyrus
nTPM: 19.0
2531 Female, age 67, both hemispheres 39.6
2246 Female, age 85, both hemispheres 23.6
2010 Male, age 76, both hemispheres 17.2
1927 Female, age 91, both hemispheres 15.0
2528 Male, age 74, both hemispheres 12.6
2530 Female, age 94, left hemisphere 6.2
Entorhinal gyrus
nTPM: 12.1
2764 Male, age 80, right hemisphere 17.1
2686 Male, age 75, right hemisphere 15.8
1787 Male, age 76, left hemisphere 13.0
2613 Female, age 94, left hemisphere 10.1
2117 Female, age 91, right hemisphere 8.6
1938 Female, age 85, left hemisphere 8.3
Hippocampus, CA1
nTPM: 20.4
2045 Male, age 76, both hemispheres 42.2
2082 Female, age 91, right hemisphere 26.6
1873 Female, age 85, both hemispheres 14.1
2527 Male, age 74, both hemispheres 10.0
2749 Male, age 80, left hemisphere 9.2
Hippocampus, CA2
nTPM: 14.9
1940 Female, age 85, left hemisphere 34.8
2113 Female, age 91, right hemisphere 19.4
1892 Male, age 76, both hemispheres 15.4
1963 Male, age 80, left hemisphere 8.1
2437 Female, age 94, left hemisphere 6.0
2249 Male, age 74, both hemispheres 5.4
Hippocampus, CA3
nTPM: 20.9
2861 Female, age 67, both hemispheres 37.1
2620 Female, age 94, left hemisphere 32.6
1867 Male, age 76, both hemispheres 20.8
1891 Female, age 85, both hemispheres 13.4
2137 Male, age 80, left hemisphere 13.2
2436 Male, age 74, both hemispheres 8.3
Parahippocampal cortex
nTPM: 16.1
2693 Female, age 94, both hemispheres 23.5
2018 Male, age 76, both hemispheres 21.1
2245 Female, age 91, both hemispheres 19.0
2622 Female, age 67, right hemisphere 18.9
1933 Female, age 85, both hemispheres 16.7
2532 Female, age 72, left hemisphere 15.3
2250 Female, age 67, right hemisphere 14.5
1850 Male, age 80, both hemispheres 13.9
1990 Female, age 91, right hemisphere 10.0
2692 Male, age 74, both hemispheres 7.7
Perirhinal gyrus
nTPM: 24.7
2521 Female, age 94, right hemisphere 44.1
1794 Male, age 80, right hemisphere 23.6
1841 Female, age 85, right hemisphere 19.9
2848 Male, age 76, right hemisphere 18.9
1847 Female, age 91, left hemisphere 16.9
Subiculum
nTPM: 11.3
2729 Female, age 91, right hemisphere 16.2
1977 Female, age 85, both hemispheres 13.4
1901 Male, age 80, both hemispheres 12.3
2042 Male, age 76, both hemispheres 10.4
2619 Male, age 74, both hemispheres 10.3
2438 Female, age 94, left hemisphere 5.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.6
Samples: 197

Max nTPM: 83.9
Min nTPM: 2.6
Std nTPM: 11.9
Median nTPM: 13.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 83.9
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 69.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 57.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 54.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 50.6
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 50.2
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 47.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 46.6
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 44.1
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 43.5
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 38.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.5
FF:10169-103B7 60 years, female 20.9
FF:10153-102I9 76 years, female 18.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.5
Samples: 4

Max nTPM: 8.1
Min nTPM: 3.7
Sample A Female 4.2
Sample B Female 8.1
Sample C Male 3.7
Sample D Male 5.9
Entorhinal cortex
nTPM: 24.4
Samples: 4

Max nTPM: 42.7
Min nTPM: 10.8
Sample A Female 42.7
Sample B Female 18.7
Sample C Male 25.5
Sample D Male 10.8
Subiculum
nTPM: 20.1
Samples: 4

Max nTPM: 30.3
Min nTPM: 11.6
Sample A Female 23.9
Sample B Female 11.6
Sample C Male 14.7
Sample D Male 30.3
Ventral hippocampus
nTPM: 7.3
Samples: 4

Max nTPM: 10.9
Min nTPM: 4.7
Sample A Female 7.0
Sample B Female 6.4
Sample C Male 10.9
Sample D Male 4.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.6
Samples: 4

Max nTPM: 56.9
Min nTPM: 37.6
Sample A Male 39.1
Sample B Male 37.6
Sample C Female 40.8
Sample D Female 56.9
Hippocampal formation
nTPM: 36.5
Samples: 4

Max nTPM: 40.5
Min nTPM: 33.0
Sample A Male 33.0
Sample B Male 38.0
Sample C Female 40.5
Sample D Female 34.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.3
70191973 Antisense, RP_050517_01_A02, Mouse strain C57BL/6J (56 days, male) 8.9
73521826 Antisense, RP_051101_03_B10, Mouse strain C57BL/6J (56 days, male) 3.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.